Karl, since you are doing something with this, how about giving me an idea of all the characteristics you would like to see, and I'll see if I can make them materialize. My first attempt with the Ramachandran plots was just a feeble attempt. What would you really like to see? How can Jmol provide character to these plots that has never been thought possible before because they were just dots on paper?
Bob Karl Oberholser wrote: >> >> >>>>>Bob Hanson <[EMAIL PROTECTED]> 10/8/2007 2:32 PM >>> >>>>> >>>>> >>Karl Oberholser wrote: >> >> >> >>> >>>I am making a tutorial in which I want to overlay several Ramachandran >>>plots, but I have not been able to find a command that will display >>>selected frames out of a series frames, e.g. display frames 2.1, 4.1, >>>6.1, but not 1.1, 3.1, 5.1. There must be such a command. What am I >>>over looking? >>> >>> >>before using >> >> display 2.1,4.1,6.1 >> >>you need to make all the frames "displayable" using: >> >> frame 0.0 >> >>So the sequence is: >> >> frame 0.0;display 2.1,4.1,6.1 >> >> > >This sequence results in a blank display, but if I do the 'move to' that I >use when I make the plot (I have been using the 'move to' to center the >plot.) then the plots come into focus. > >I would like each set of points to have a different color, and I set the >color when doing ramachandran, but when the multiple frames are displayed >all points have the color of the last plot frame made. > >When doing ramachandran multiple times, the axis only appears in the first >display of the results. > >Karl > > > >>Bob >> >> >> >> >> >>> >>>Karl >>> >>> >>>------------------------------------------------------------------------ >>> >>>------------------------------------------------------------------------- >>>This SF.net email is sponsored by: Splunk Inc. >>>Still grepping through log files to find problems? Stop. >>>Now Search log events and configuration files using AJAX and a browser. >>>Download your FREE copy of Splunk now >> http://get.splunk.com/ >>> >>>------------------------------------------------------------------------ >>> >>>_______________________________________________ >>>Jmol-users mailing list >>>[email protected] >>>https://lists.sourceforge.net/lists/listinfo/jmol-users >>> >>> >>> >>> >>-- >>Robert M. Hanson >>Professor of Chemistry >>St. Olaf College >>Northfield, MN >>http://www.stolaf.edu/people/hansonr >> >> >>If nature does not answer first what we want, >>it is better to take what answer we get. >> >>-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 >> >> >> >>------------------------------------------------------------------------- >>This SF.net email is sponsored by: Splunk Inc. >>Still grepping through log files to find problems? Stop. >>Now Search log events and configuration files using AJAX and a browser. >>Download your FREE copy of Splunk now >> http://get.splunk.com/ >>_______________________________________________ >>Jmol-users mailing list >>[email protected] >>https://lists.sourceforge.net/lists/listinfo/jmol-users >> >> > > >------------------------------------------------------------------------- >This SF.net email is sponsored by: Splunk Inc. >Still grepping through log files to find problems? Stop. >Now Search log events and configuration files using AJAX and a browser. >Download your FREE copy of Splunk now >> http://get.splunk.com/ >_______________________________________________ >Jmol-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/jmol-users > > -- Robert M. Hanson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
