Karl (and others), how does this sound? I think I could implement these. 1) For any given structure in the model set, there is at most one Ramachandran plot. 2) You can redefine a Ramachandran plot as many times as you like. 3) You can display any or all atoms of a model in a Ramachandran plot. 4) You can save Ramachandran plots in PDB file format. 5) You can load a Ramachandran plot independently of any model. 6) You can overlay Ramachandran plots from different structures. 7) If multiple Ramachandran plots are defined, they all track together in terms of orientation. 8) If you load APPEND to a model, its Ramachadran plot is updated accordingly. 9) All ramachandran plots will be managed as a single "file set" -- 2.1, 2.2, 2.3, etc. --
What else? 10) Axes on/off apply to Ramachandron plots independently? 11) Default atom coloring is by structure type (helix, sheet, turn, none). More? Bob -- Robert M. Hanson Professor of Chemistry St. Olaf College Northfield, MN http://www.stolaf.edu/people/hansonr If nature does not answer first what we want, it is better to take what answer we get. -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
