Bob, You have hit most of the points that I have been thinking of and then some. The one thing to add to the list would be labels for the axes, psi (degrees) & phi (degrees).
Karl Bob Hanson <[EMAIL PROTECTED]> 10/10/2007 2:09 PM >>> >Karl (and others), how does this sound? I think I could implement these. > >1) For any given structure in the model set, there is at most one >Ramachandran plot. >2) You can redefine a Ramachandran plot as many times as you like. >3) You can display any or all atoms of a model in a Ramachandran plot. >4) You can save Ramachandran plots in PDB file format. >5) You can load a Ramachandran plot independently of any model. >6) You can overlay Ramachandran plots from different structures. >7) If multiple Ramachandran plots are defined, they all track together >in terms of orientation. >8) If you load APPEND to a model, its Ramachadran plot is updated >accordingly. >9) All ramachandran plots will be managed as a single "file set" -- 2.1, >2.2, 2.3, etc. -- > >What else? > >10) Axes on/off apply to Ramachandron plots independently? >11) Default atom coloring is by structure type (helix, sheet, turn, none). > >More? > >Bob > > >-- >Robert M. Hanson >Professor of Chemistry >St. Olaf College >Northfield, MN >http://www.stolaf.edu/people/hansonr > > >If nature does not answer first what we want, >it is better to take what answer we get. > >-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > > >------------------------------------------------------------------------- >This SF.net email is sponsored by: Splunk Inc. >Still grepping through log files to find problems? Stop. >Now Search log events and configuration files using AJAX and a browser. >Download your FREE copy of Splunk now >> http://get.splunk.com/ >_______________________________________________ >Jmol-users mailing list >[email protected] >https://lists.sourceforge.net/lists/listinfo/jmol-users ------------------------------------------------------------------------- This SF.net email is sponsored by: Splunk Inc. Still grepping through log files to find problems? Stop. Now Search log events and configuration files using AJAX and a browser. Download your FREE copy of Splunk now >> http://get.splunk.com/ _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
