I found the bug. Will update.

On Thu, Jun 3, 2010 at 2:09 PM, Robert Hanson <[email protected]> wrote:

> It's not supposed to be autobonding at all in this mode.
>
> On Thu, Jun 3, 2010 at 11:05 AM, Otis Rothenberger 
> <[email protected]>wrote:
>
>>  Bob,
>>
>> I've had some time to play with model kit mode, and I have four questions
>> at this point in time:
>>
>> 1) Can hydrogen atoms be excluded from bonding to each other under the
>> auto bond feature associated with model construction and minimization? The
>> attempt below to construct NH3 from CH4 illustrates the problem:
>>
>>
>>
>>
> how exactly did you get this?
>
>
>> 2) In conjunction with the above question, is there a scripting hook to
>> turn this feature (auto bond) on and off?
>>
>> 3) Generalizing the above point, do you have a list of model kit related
>> scripting hooks (set commands) to control some of the menu features with
>> external links or buttons?
>>
>>
> They definitely are just script commands. The listing is pretty easy to
> read. It's in <
> http://jmol.svn.sourceforge.net/viewvc/jmol/trunk/Jmol/src/org/jmol/modelkit/modelKitPopupResourceBundle.java>
>
>
> All the menu items of the form "assign.....P!CB" correlate with the script
> command
>
> set picking assign.....
>
> The rest are listed below that in an array. Ignore "clearQ" -- that just
> tells Jmol to reset the menu items that have question marks in them.
>
>
>  4) Is a model kit load menu similar to the Jmol load menu command a
>> possibility?
>>
>
> eventually, maybe. Not right now.
>
>>
>> Otis
>>
>> --
>> Otis Rothenbergerchemagic.com
>>
>>
>>
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>>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>



-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900

<<moz-screenshot-4.png>>

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