Another option is to invest in some screencast software 
(http://en.wikipedia.org/wiki/Screencast) and simply capture what's going on in 
the Jmol window.

Some of these programs (like ScreenFlow)  also have editing capabilities that 
allow you to annotate and smooth things out a bit (for example remove long 
loading times).

An example: 
http://molecularmodelingbasics.blogspot.com/2009/09/computational-chemistry-movie.html

Best regards, Jan
 
=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-
Jan H. Jensen                           Professor
Department of Chemistry         [email protected]
University of Copenhagen                Phone: +45 35 32 02 39
Universitetsparken 5                    FAX:   +45 35 32 02 14
2100 Copenhagen                 Denmark
http://tinyurl.com/jhjensen
http://molecularmodelingbasics.blogspot.com                     
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On Jun 21, 2010, at 3:40 PM, Paul Pillot wrote:

> The chimera software allows you to generate movies from such commands (the 
> Jmol's "moveto" equivalent is called "fly" in chimera). You may not find an 
> equivalent to all of Jmol's versatile commands (I haven't been able to make a 
> smooth  scaling from vdw to ball & stick for example), but for most 
> animations purposes it can be more than sufficient.
> 
> Paul
> 
> Le 21 juin 2010 à 15:20, Robert Hanson a écrit :
> 
>> There is not a way to automatically create files from a moveto command. 
>> There is a way to create files from standard frame-based animation. For this 
>> you use "write frames". But the idea of writing a file for each step in a 
>> moveto operation is not available. 
>> 
>> 
>> 
>> 
>> On Sun, Jun 20, 2010 at 2:58 AM, Alexander Rose 
>> <[email protected]> wrote:
>> Hi all,
>> 
>> I started looking into using jmol to create videos.
>> 
>> As I have understood so far, the approach is to create some scene (color, 
>> orientation, ...), issue a 'write image', create a new scene using jmol 
>> script, issue a 'write image', and so forth. Afterwards you need to 
>> concatenate the images to a movie. There are the nice moveto, navigate, 
>> zoomto commands, which create nice animations. Is there a way to use these 
>> to create images for a movies? Thanks.
>> 
> 
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