what version are you using?
On Wed, Aug 31, 2011 at 3:19 PM, Robert Hanson <[email protected]> wrote:
> When I load three files and display all using frame *
> and then use
>
> select 1.1 or 2.1
> set picking dragselected
>
> alt-drag and alt-shift drag work as expected.
>
> On Wed, Aug 31, 2011 at 8:48 AM, Martin Hediger <[email protected]> wrote:
>
>> Dear List
>> A question on how to rotate two structures simultaneously.
>> In a Jmol Applet, the following script is executed (exemplified):
>>
>> [begin of script]
>> load protein.pdb
>> load APPEND pqr::protein_charge_distribution.pqr
>> select 1.1
>> ribbon only
>> select 2.1
>> set propertycolorscheme "bwr"
>> color property partialcharge range -1.0 1.0
>> spacefill 100%
>> //At this point, the protein displays nicely as a ribbon structure
>> //where some charges are superimposed as pink spheres.
>> //In the PQR file, the charges range from -1.0 to +1.0, so I
>> //was hoping to see different colors.
>> //If i now open a console and enter the "set propertycolorscheme \"bwr\""
>> //and "color property partialcharge range -1.0 1.0" command again
>> //the spheres turn from pink to white.
>> //Nevermind, now I want to enable that both the ribbon structure and the
>> charges
>> //can be rotated by the user (using alt+<LEFT_MOUSE>)
>> select 1.1, 2.1
>> set allowRotateSelected True
>> [end of script]
>>
>> Unfortunately, only the charges are rotatable and naturally the
>> superposition
>> with the ribbon structure is lost.
>> However, if I enter the command "select 1.1, 2.1" into a console (after
>> the jmol applet loaded), the ribbon as well
>> as the charges distribution become rotatable exactly in the way as I
>> wish. Its just not
>> so by default which I would like to enable.
>>
>> Thank you for any feedback on this.
>> Martin Hediger
>>
>>
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>
>
>
> --
> Robert M. Hanson
> Professor of Chemistry
> St. Olaf College
> 1520 St. Olaf Ave.
> Northfield, MN 55057
> http://www.stolaf.edu/people/hansonr
> phone: 507-786-3107
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
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Finally, a world-class log management solution at an even better
price-free! And you'll get a free "Love Thy Logs" t-shirt when you
download Logger. Secure your free ArcSight Logger TODAY!
http://p.sf.net/sfu/arcsisghtdev2dev
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