OK, so I'm catching on. This is not a PDB file -- this is a PDB-like file
with extra rules written specifically for Rasmol. I guess at some point I
didn't realize that Rasmol had its own specifications for PDB files. We can
put that back in. See
http://chemapps.stolaf.edu/jmol/docs/examples-12/Jmol-12.zip
Bob
2011/10/3 Angel Herráez <angel.herr...@uah.es>
> Well, who knows... :(
>
> Sara's fumarate.pdb loads without the double bonds in Jml 12.0.49, but
> displays the double
> bonds as intended in 11.0.3, 11.8.25, 12.0.30
>
> So it's Jmol that is failing!
>
>
> On 3 Oct 2011 at 11:00, Sara Bonner wrote:
>
> > I've attached the format example for inserting double bonds using CONECT
> in a pdb. I was unable to see double bonds when I loaded this file or
> modified other files using this format.
>
>
>
>
> ------------------------------------------------------------------------------
> All the data continuously generated in your IT infrastructure contains a
> definitive record of customers, application performance, security
> threats, fraudulent activity and more. Splunk takes this data and makes
> sense of it. Business sense. IT sense. Common sense.
> http://p.sf.net/sfu/splunk-d2dcopy1
> _______________________________________________
> Jmol-users mailing list
> Jmol-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/jmol-users
>
--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
All the data continuously generated in your IT infrastructure contains a
definitive record of customers, application performance, security
threats, fraudulent activity and more. Splunk takes this data and makes
sense of it. Business sense. IT sense. Common sense.
http://p.sf.net/sfu/splunk-d2dcopy1
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-users
