On 13 Feb 2007, at 11:23, Etai Jacob wrote:
Hi,
My answers below.
Hi Etai,
maybe we need a little bit more debugging there.
Could you change the
log4perl.threshold = FATAL
to
log4perl.threshold = WARN
in biomart-perl/conf/log4perl.conf
restart the server and see what you get
in the error_log?
cheers,
a.
What do you mean by not seeing any results? Do you mean that you get
an error message?
I don't get any error messages, not on the web browser (firefox or
explorer) and not in the error log file of the httpd.
Or you see the results page but the table only has
headings?
No heading.
What happens exactly?
When pressing the "results" it waits a second and then when "Done" the
page stays blank (except the default GUI of the martview on the left
side of the page).
Could you try a query with no filters at all and just one or two
attributes to see if you get results?
Yes I tried with many combinations. Nothing.
I tried other biomart web interface,
http://www.dictybase.org/biomart/martview/, to see whether I have a
problem with the browser or JVM but it works fine.
Thanks,
Etai
Etai Jacob wrote:
> Hi,
>
> I am trying to execute few basic queries using the biomart web
> interface with the default configurations (as instructed in the
> installation guide).
> I don't get to see any results on the browser even though at the
count
> stage I see that there are relevant entries (i.e. 1/3967).
>
> What could be the problem?
> Thanks,
> Etai
>
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.2.2 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org
iD8DBQFF0YZf4C5LeMEKA/QRAnfjAJ4ryJaiBgNwabuiZNFijhNEvTsz8wCfa9bu
1QBsgL/hNLndGODDdK9wmu8=
=Ro2C
-----END PGP SIGNATURE-----
------------------------------------------------------------------------
-------
Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
------------------------------------------------------------------------
-------
