Hi Tomas, XCMS runs correctly as standalone application in R. I also tried re installing. Deconvolution runs correctly for the first 4 files (Quad core). But it shows error when it goes to second set of four files. Please have a look at the attached error files I appreciate your advice regards
Raghavendra Gunnaiah Ph.D Scholar R1-013,Department of Plant Science McGill University Macdonald Campus 21,111 Lakeshore Road Ste. Anne de Bellevue, QC H9X 3V9 ________________________________ From: Tomas Pluskal [plus...@oist.jp] Sent: September 9, 2012 10:30 PM To: Developer discussion Cc: Raghavendra Gunnaiah Subject: Re: [Mzmine-devel] Java run time error Hi Raghavendra, The problem must be somewhere in the connection between MZmine and R. I would suggest to try to run XCMS as a standalone application to see if the error occurs, too. Best regards, Tomas On Sep 10, 2012, at 6:19 AM, Raghavendra Gunnaiah <raghavendra.gunna...@mail.mcgill.ca<mailto:raghavendra.gunna...@mail.mcgill.ca>> wrote: Dear Developers, I am getting the following error after running four files of deconvolution (XCMS) "java (TM) platform SE binary has stopped working". I tried unistalling and re installing different versions of java (1.6.34, 1.6.35 and 1.7). Everything goes well until deconvolution. Once it finishes first set of four files, I get this error. I am working on 64 bit system with quad core and 8 gb RAM. I appreciate your suggestions in overcoming this this error Raghavendra Gunnaiah Ph.D Scholar R1-013,Department of Plant Science McGill University Macdonald Campus 21,111 Lakeshore Road Ste. Anne de Bellevue, QC H9X 3V9 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net<mailto:Mzmine-devel@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/mzmine-devel =============================================== Tomáš Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890
hs_err_pid5152.log
Description: hs_err_pid5152.log
hs_err_pid5596.log
Description: hs_err_pid5596.log
------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/
_______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel