Hi Raghavendra, Were you running this from a networked drive? If so that could be the cause of the error. It's a C++ exception ending up in the VM. I thought it had been fixed though. It might be worth reporting it to Sun.
Cheers, Gavin. -----Original Message----- From: Raghavendra Gunnaiah [mailto:raghavendra.gunna...@mail.mcgill.ca] Sent: 19 September 2012 17:05 To: Developer discussion Subject: Re: [Mzmine-devel] Java run time error Hi Tomas, XCMS runs correctly as standalone application in R. I also tried re installing. Deconvolution runs correctly for the first 4 files (Quad core). But it shows error when it goes to second set of four files. Please have a look at the attached error files I appreciate your advice regards Raghavendra Gunnaiah Ph.D Scholar R1-013,Department of Plant Science McGill University Macdonald Campus 21,111 Lakeshore Road Ste. Anne de Bellevue, QC H9X 3V9 ________________________________ From: Tomas Pluskal [plus...@oist.jp] Sent: September 9, 2012 10:30 PM To: Developer discussion Cc: Raghavendra Gunnaiah Subject: Re: [Mzmine-devel] Java run time error Hi Raghavendra, The problem must be somewhere in the connection between MZmine and R. I would suggest to try to run XCMS as a standalone application to see if the error occurs, too. Best regards, Tomas On Sep 10, 2012, at 6:19 AM, Raghavendra Gunnaiah <raghavendra.gunna...@mail.mcgill.ca<mailto:raghavendra.gunna...@mail.mcgill.ca>> wrote: Dear Developers, I am getting the following error after running four files of deconvolution (XCMS) "java (TM) platform SE binary has stopped working". I tried unistalling and re installing different versions of java (1.6.34, 1.6.35 and 1.7). Everything goes well until deconvolution. Once it finishes first set of four files, I get this error. I am working on 64 bit system with quad core and 8 gb RAM. I appreciate your suggestions in overcoming this this error Raghavendra Gunnaiah Ph.D Scholar R1-013,Department of Plant Science McGill University Macdonald Campus 21,111 Lakeshore Road Ste. Anne de Bellevue, QC H9X 3V9 ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net<mailto:Mzmine-devel@lists.sourceforge.net> https://lists.sourceforge.net/lists/listinfo/mzmine-devel =============================================== Tomáš Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890 ------------------------------------------------------------------------------ Got visibility? Most devs has no idea what their production app looks like. Find out how fast your code is with AppDynamics Lite. http://ad.doubleclick.net/clk;262219671;13503038;y? http://info.appdynamics.com/FreeJavaPerformanceDownload.html _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
