Good news. I had wondered about using a PI myself but was concerned with lack of realtimeness. BTW, in regular UNIX you would set your app up as a demon that runs at boot up. Crontab would not be the way to go. There should be a bunch of stuff in /etc/init.d or /etc/initd or something like that. You'll have to google the details, you should be able to specify at what stage in the boot process it gets run and as what user.
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