Hi Marek, on blast 2.2.10 there was still a slight difference in the number of hits above 50% identity. I raised the minimum identity to 60% and now blast 2.2.10 gets the same number of hits as your 2.2.20. See branch:
http://github.com/cjlee112/pygr/tree/blast_mergeMost Since the tests are now passing with both versions of blast, and you have manually verified that Pygr's results match what BLAST reports, I suggest that we push this to master. -- Chris --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
