On Sep 3, 2009, at 12:15 PM, Paul Rigor (gmail) wrote:
> But don't I also have to build the individual genome resources as > well? In any case, it would be great if the non-existent ponAbe2 > genome would be made available through XMLRPC as well. I don't know what exactly your script tries to do, but download=True mode is intended to be a one-step method of getting a target resource and ALL its dependencies. That means if you request the 44 genome alignment with download=True, it will automatically get the 44 genomes also with download=True. In each case it will check your local resources first; if you have a given resource locally already, of course it will not be downloaded again. Note that you must have a writable local metabase in your WORLDBASEPATH, so that it can automatically save your downloaded resources to a local metabase for future re-use (i.e. so that in the future it will know that the data are available locally, and how to load them). The bottom line is: you just type msa = worldbase.Bio.MSA.UCSC.hg18_multiz44way(download=True) and it should do everything for you. If that is not working with this specific resource, tell us, so that we can fix that. -- Chris --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to pygr-dev@googlegroups.com To unsubscribe from this group, send email to pygr-dev+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
