Thank you, Jason. I guess I need to dig in the mailing list archive to find a bit more information on the usage of "mdo", since at this time I am rather confused at the proper application of "mview" and "mdo" for the scene transitions (aka movies).
Vitaly ----- Original Message ----- From: Jason Vertrees <jason.vertr...@schrodinger.com> Date: Tuesday, April 20, 2010 9:57 am Subject: Re: [PyMOL] Label size in different scenes To: Vitaly Vostrikov <vvos...@uark.edu> Cc: pymol-users@lists.sourceforge.net > Vitaly, > > What you want is the "mdo" command. Check it out: > http://www.pymolwiki.org/index.php/Mdo. > > We are planning to add features like frame-based settings in a > future release. > > Cheers, > > -- Jason > > On Tue, Apr 20, 2010 at 1:09 AM, Vitaly Vostrikov > <vvos...@uark.edu> wrote: > > After playing around for several days, I have a related question > about settings and selections. > > > > I have a surface representation of a protein: whole structure in > scene 1 and a zoomed segment in scene 2. I would like to decrease > the quality for the first scene, but boost it up for the second > one. I have tried scripting this with "set surface_quality, 0, all" > in the first scene and "set surface_quality, 1, all" in the second > one, but this does not seem to work: when the script is executed, > the latter setting takes effect. > > > > So, I guess my question is, is it possible to store the quality > settings in a Pymol scene? > > > > Thank you. > > > > Vitaly > > > > ----- Original Message ----- > > From: Jason Vertrees <jason.vertr...@schrodinger.com> > > Date: Tuesday, April 13, 2010 4:47 pm > > Subject: Re: [PyMOL] Label size in different scenes > > To: Vitaly Vostrikov <vvos...@uark.edu> > > Cc: pymol-users@lists.sourceforge.net > > > >> Vitaly, > >> > >> Great, glad to hear it. Most PyMOL settings now work on a "per > >> object" basis. For example, > >> > >> set color, red, objectName > >> > >> set sphere_scale, 0.71, solvent > >> > >> set state, 4, objectName > >> > >> Cheers, > >> > >> -- Jason > >> > >> On Tue, Apr 13, 2010 at 4:00 PM, Vitaly Vostrikov > >> <vvos...@uark.edu> wrote: > >> > Jason, > >> > > >> > Thank you very much - it worked perfectly! I did not realize it > >> is possible to apply that for individual objects. > >> > > >> > Vitaly > >> > > >> > > >> > ----- Original Message ----- > >> > From: Jason Vertrees <jason.vertr...@schrodinger.com> > >> > Date: Tuesday, April 13, 2010 1:58 pm > >> > Subject: Re: [PyMOL] Label size in different scenes > >> > To: Vitaly Vostrikov <vvos...@uark.edu> > >> > Cc: pymol-users@lists.sourceforge.net > >> > > >> >> Vitaly, > >> >> > >> >> You can set label_size per object: > >> >> > >> >> set label_size, -0.35, pseudo1 > >> >> set label_size, -0.50, pseudo2 > >> >> > >> >> I recently ran into similar issues. My solution was to make > use of > >> >> the mdo command. Try "help mdo" and check out the PyMOLWiki > page>> >> http://www.pymolwiki.org/index.php/Mdo. > >> >> > >> >> Cheers, > >> >> > >> >> -- Jason > >> >> > >> >> On Tue, Apr 13, 2010 at 12:42 PM, Vitaly Vostrikov > >> >> <vvos...@uark.edu> wrote: > >> >> > Hello, > >> >> > > >> >> > I am learning movie-making in Pymol, and I have a question > about>> >> label size. > >> >> > > >> >> > I have a script with one state and several scenes, and I would > >> >> like to introduce titles for each scene. I create pseudoatoms > for>> >> each scene and label them, but because of the different > length of > >> >> text, I would like to have different font size. I thought I > could>> >> do this just by moving pseudoatom further away, but the > font size > >> >> in the labels seems to be the "final" size that you see on the > >> >> screen, no matter where a pseudoatom is located. Also, if I > >> >> understand correctly, it is not possible to use the "set > >> >> label_size" command for every scene, as the latest executed one > >> >> will override the previous ones. > >> >> > > >> >> > Is there a workaround for this one? > >> >> > > >> >> > Thank you, > >> >> > Vitaly > >> >> > > >> >> > ------------------------------------------------------------ > --- > >> --- > >> >> ------------ > >> >> > Download Intel® Parallel Studio Eval > >> >> > Try the new software tools for yourself. Speed compiling, find > >> bugs>> > proactively, and fine-tune applications for parallel > >> performance.>> > See why Intel Parallel Studio got high marks > >> during beta. > >> >> > http://p.sf.net/sfu/intel-sw-dev > >> >> > _______________________________________________ > >> >> > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > >> >> > Info Page: > https://lists.sourceforge.net/lists/listinfo/pymol- > >> users>> > Archives: http://www.mail-archive.com/pymol- > >> >> us...@lists.sourceforge.net> > >> >> > >> >> > >> >> > >> >> -- > >> >> Jason Vertrees, PhD > >> >> PyMOL Product Manager > >> >> Schrodinger, LLC > >> >> > >> >> (e) jason.vertr...@schrodinger.com > >> >> (o) +1 (603) 374-7120 > >> >> > >> > > >> > >> > >> > >> -- > >> Jason Vertrees, PhD > >> PyMOL Product Manager > >> Schrodinger, LLC > >> > >> (e) jason.vertr...@schrodinger.com > >> (o) +1 (603) 374-7120 > >> > > > > > > -- > Jason Vertrees, PhD > PyMOL Product Manager > Schrodinger, LLC > > (e) jason.vertr...@schrodinger.com > (o) +1 (603) 374-7120 > ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
