Vitaly, mview just handles the position of the camera and clipping planes.
mdo repeats given command(s) before the rendering of a given frame. The PyMOLWiki, the list archives and Google should offer more help. -- Jason On 4/20/10, Vitaly Vostrikov <vvos...@uark.edu> wrote: > Thank you, Jason. > > I guess I need to dig in the mailing list archive to find a bit more > information on the usage of "mdo", since at this time I am rather confused > at the proper application of "mview" and "mdo" for the scene transitions > (aka movies). > > Vitaly > > ----- Original Message ----- > From: Jason Vertrees <jason.vertr...@schrodinger.com> > Date: Tuesday, April 20, 2010 9:57 am > Subject: Re: [PyMOL] Label size in different scenes > To: Vitaly Vostrikov <vvos...@uark.edu> > Cc: pymol-users@lists.sourceforge.net > >> Vitaly, >> >> What you want is the "mdo" command. Check it out: >> http://www.pymolwiki.org/index.php/Mdo. >> >> We are planning to add features like frame-based settings in a >> future release. >> >> Cheers, >> >> -- Jason >> >> On Tue, Apr 20, 2010 at 1:09 AM, Vitaly Vostrikov >> <vvos...@uark.edu> wrote: >> > After playing around for several days, I have a related question >> about settings and selections. >> > >> > I have a surface representation of a protein: whole structure in >> scene 1 and a zoomed segment in scene 2. I would like to decrease >> the quality for the first scene, but boost it up for the second >> one. I have tried scripting this with "set surface_quality, 0, all" >> in the first scene and "set surface_quality, 1, all" in the second >> one, but this does not seem to work: when the script is executed, >> the latter setting takes effect. >> > >> > So, I guess my question is, is it possible to store the quality >> settings in a Pymol scene? >> > >> > Thank you. >> > >> > Vitaly >> > >> > ----- Original Message ----- >> > From: Jason Vertrees <jason.vertr...@schrodinger.com> >> > Date: Tuesday, April 13, 2010 4:47 pm >> > Subject: Re: [PyMOL] Label size in different scenes >> > To: Vitaly Vostrikov <vvos...@uark.edu> >> > Cc: pymol-users@lists.sourceforge.net >> > >> >> Vitaly, >> >> >> >> Great, glad to hear it. Most PyMOL settings now work on a "per >> >> object" basis. For example, >> >> >> >> set color, red, objectName >> >> >> >> set sphere_scale, 0.71, solvent >> >> >> >> set state, 4, objectName >> >> >> >> Cheers, >> >> >> >> -- Jason >> >> >> >> On Tue, Apr 13, 2010 at 4:00 PM, Vitaly Vostrikov >> >> <vvos...@uark.edu> wrote: >> >> > Jason, >> >> > >> >> > Thank you very much - it worked perfectly! I did not realize it >> >> is possible to apply that for individual objects. >> >> > >> >> > Vitaly >> >> > >> >> > >> >> > ----- Original Message ----- >> >> > From: Jason Vertrees <jason.vertr...@schrodinger.com> >> >> > Date: Tuesday, April 13, 2010 1:58 pm >> >> > Subject: Re: [PyMOL] Label size in different scenes >> >> > To: Vitaly Vostrikov <vvos...@uark.edu> >> >> > Cc: pymol-users@lists.sourceforge.net >> >> > >> >> >> Vitaly, >> >> >> >> >> >> You can set label_size per object: >> >> >> >> >> >> set label_size, -0.35, pseudo1 >> >> >> set label_size, -0.50, pseudo2 >> >> >> >> >> >> I recently ran into similar issues. My solution was to make >> use of >> >> >> the mdo command. Try "help mdo" and check out the PyMOLWiki >> page>> >> http://www.pymolwiki.org/index.php/Mdo. >> >> >> >> >> >> Cheers, >> >> >> >> >> >> -- Jason >> >> >> >> >> >> On Tue, Apr 13, 2010 at 12:42 PM, Vitaly Vostrikov >> >> >> <vvos...@uark.edu> wrote: >> >> >> > Hello, >> >> >> > >> >> >> > I am learning movie-making in Pymol, and I have a question >> about>> >> label size. >> >> >> > >> >> >> > I have a script with one state and several scenes, and I would >> >> >> like to introduce titles for each scene. I create pseudoatoms >> for>> >> each scene and label them, but because of the different >> length of >> >> >> text, I would like to have different font size. I thought I >> could>> >> do this just by moving pseudoatom further away, but the >> font size >> >> >> in the labels seems to be the "final" size that you see on the >> >> >> screen, no matter where a pseudoatom is located. Also, if I >> >> >> understand correctly, it is not possible to use the "set >> >> >> label_size" command for every scene, as the latest executed one >> >> >> will override the previous ones. >> >> >> > >> >> >> > Is there a workaround for this one? >> >> >> > >> >> >> > Thank you, >> >> >> > Vitaly >> >> >> > >> >> >> > ------------------------------------------------------------ >> --- >> >> --- >> >> >> ------------ >> >> >> > Download Intel® Parallel Studio Eval >> >> >> > Try the new software tools for yourself. Speed compiling, find >> >> bugs>> > proactively, and fine-tune applications for parallel >> >> performance.>> > See why Intel Parallel Studio got high marks >> >> during beta. >> >> >> > http://p.sf.net/sfu/intel-sw-dev >> >> >> > _______________________________________________ >> >> >> > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) >> >> >> > Info Page: >> https://lists.sourceforge.net/lists/listinfo/pymol- >> >> users>> > Archives: http://www.mail-archive.com/pymol- >> >> >> us...@lists.sourceforge.net> >> >> >> >> >> >> >> >> >> >> >> >> -- >> >> >> Jason Vertrees, PhD >> >> >> PyMOL Product Manager >> >> >> Schrodinger, LLC >> >> >> >> >> >> (e) jason.vertr...@schrodinger.com >> >> >> (o) +1 (603) 374-7120 >> >> >> >> >> > >> >> >> >> >> >> >> >> -- >> >> Jason Vertrees, PhD >> >> PyMOL Product Manager >> >> Schrodinger, LLC >> >> >> >> (e) jason.vertr...@schrodinger.com >> >> (o) +1 (603) 374-7120 >> >> >> > >> >> >> >> -- >> Jason Vertrees, PhD >> PyMOL Product Manager >> Schrodinger, LLC >> >> (e) jason.vertr...@schrodinger.com >> (o) +1 (603) 374-7120 >> > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
