Hi Roger, Just to clarify, for the FTP protocol the correct prefix is
ftp://ftp.wwpdb.org/ and NOT http://ftp ... Hope that makes sense, Andreas On Tue, Mar 22, 2011 at 9:54 AM, Jason Vertrees <jason.vertr...@schrodinger.com> wrote: > Great, thanks, David. Just ensuring the problems been isolated. > > Cheers, > > -- Jason > > On Tue, Mar 22, 2011 at 9:53 AM, David Hall <li...@cowsandmilk.net> wrote: >> Resolves fine for me. >> >> -David >> >> On Mar 22, 2011, at 12:30 PM, Jason Vertrees >> <jason.vertr...@schrodinger.com> wrote: >> >>> Hi Roger, >>> >>> On Tue, Mar 22, 2011 at 9:20 AM, Roger Rowlett <rrowl...@colgate.edu> wrote: >>>> Hmm. At the RCSB site, I can see that the ftp server is ftp.wwpdb.org and >>>> it >>>> is currently generating a "cannot be found" error". I'll investigate >>>> further. This may be the issue with pymol if it is using that server path. >>> >>> This is clearly the reason for the error. PyMOL looks for PDBs at the >>> main PDB site at the following path: >>> >>> ftp://ftp.wwpdb.org/pub/pdb/data/structures/divided/pdb/ >>> >>> and then appends the appropriate extension, which resolves and lists >>> PDBs just fine (from my machine). >>> >>> Is anyone else having this error or just Roger? >>> >>> Cheers, >>> >>> -- Jason >>> >>> -- >>> Jason Vertrees, PhD >>> PyMOL Product Manager >>> Schrodinger, LLC >>> >>> (e) jason.vertr...@schrodinger.com >>> (o) +1 (603) 374-7120 >>> >>> ------------------------------------------------------------------------------ >>> Enable your software for Intel(R) Active Management Technology to meet the >>> growing manageability and security demands of your customers. Businesses >>> are taking advantage of Intel(R) vPro (TM) technology - will your software >>> be a part of the solution? Download the Intel(R) Manageability Checker >>> today! http://p.sf.net/sfu/intel-dev2devmar >>> _______________________________________________ >>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) >>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net >> > > > > -- > Jason Vertrees, PhD > PyMOL Product Manager > Schrodinger, LLC > > (e) jason.vertr...@schrodinger.com > (o) +1 (603) 374-7120 > > ------------------------------------------------------------------------------ > Enable your software for Intel(R) Active Management Technology to meet the > growing manageability and security demands of your customers. Businesses > are taking advantage of Intel(R) vPro (TM) technology - will your software > be a part of the solution? Download the Intel(R) Manageability Checker > today! http://p.sf.net/sfu/intel-dev2devmar > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- ----------------------------------------------------------------------- Dr. Andreas Prlic Senior Scientist, RCSB PDB Protein Data Bank University of California, San Diego (+1) 858.246.0526 ----------------------------------------------------------------------- ------------------------------------------------------------------------------ Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
