I am using PYMOL2.4.1 on windows. I want to make two cartoon helices transparent in an object having 10 heleices. Before version 2.3, I would make a copy of the object, hide the two transparent helices on the original object and show them on the copy with transparency set to 0.5. After PYMOL2.3, cartoon-transparency is supposed to work on the atom level, but when I try to apply cartoon transparency to the two helices as a selection (cartoon_transparency,0.5,sele), the helices change color but do not become transparent. Am I doing something wrong?
-- Criss Hartzell
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