Hi Juan,
cophyloplot() has the options col, lwd, and lty which specify the
aspects of the association lines.
Le 27/05/2014 16:09, Juan Antonio Balbuena a écrit :
Hello
This is a simple question and hope that there is a simple answer.
Plotting a tanglegram, I would like to write a function where congruent
tips on both trees are marked, say, with continuous lines, whereas
incongruent tips are marked differently (for instance with stippled
lines). A starting point could be using cophyloplot() specifying
assoc=NULL and then use segment() to plot the lines accordingly, but how
can one get the x, y coordinates for segment()?
This is not possible (at least easily) because this function uses a
different system than plot.phylo().
HTH
Best,
Emmanuel
Any thoughts will be much appreciated.
Juan A. balbuena
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Dr. Juan A. Balbuena
Cavanilles Institute of Biodiversity and Evolutionary Biology
University of Valencia http://www.uv.es/~balbuena
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