r-sig-phylo

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2023/11/29 [R-sig-phylo] An Introduction to Spatial Eco-Phylogenetics and Comparative Methods (SECM01) Oliver Hooker
2023/11/06 [R-sig-phylo] Comparing rates from fitContinuous in geiger Jeremiah Scott
2023/10/31 Re: [R-sig-phylo] HPD in threshBayes function (phytools) Leonardo Matheus Servino
2023/10/30 Re: [R-sig-phylo] HPD in threshBayes function (phytools) Liam J. Revell
2023/10/30 [R-sig-phylo] HPD in threshBayes function (phytools) Leonardo Matheus Servino
2023/10/29 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Russell Engelman
2023/10/28 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Russell Engelman
2023/10/28 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Liam J. Revell
2023/10/28 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot William Gearty
2023/10/28 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Russell Engelman
2023/10/27 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot William Gearty
2023/10/26 Re: [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Emmanuel Paradis
2023/10/26 [R-sig-phylo] Highlighting Specific Clades in a Lineage-Through-Time Plot Russell Engelman
2023/10/21 [R-sig-phylo] Postdoc in phylogenetic comparative methods at UMiami Liam J. Revell
2023/09/20 [R-sig-phylo] The Practice of RADseq: Population Genomics Analysis with Stacks (RADS02) Oliver Hooker
2023/09/02 [R-sig-phylo] Assistant Professor position in phylogenetics at CSU Sloan,Dan
2023/08/22 Re: [R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap Felipe Rossetto
2023/08/22 Re: [R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap Liam J. Revell
2023/08/22 [R-sig-phylo] command for access posterior probabilities values of pie charts obtained from make.simmap Felipe Rossetto
2023/08/16 [R-sig-phylo] Warning NaNs produced in hisse Leonardo Matheus Servino
2023/08/11 Re: [R-sig-phylo] print circles in the tree nodes coloring by PP Pedro Taucce
2023/08/11 Re: [R-sig-phylo] print circles in the tree nodes coloring by PP Liam J. Revell
2023/08/10 [R-sig-phylo] print circles in the tree nodes coloring by PP Pedro Taucce
2023/08/08 [R-sig-phylo] ONLINE COURSE – Machine Learning with R (Intermediate – Advanced) (MLIA01) Oliver Hooker
2023/08/03 [R-sig-phylo] Warnings after running brm Leonardo Matheus Servino
2023/07/28 Re: [R-sig-phylo] Possible problem with Scaled likelihoods in ancestral state estimation Liam J. Revell
2023/07/28 [R-sig-phylo] Possible problem with Scaled likelihoods in ancestral state estimation Laura Schaedler
2023/07/21 Re: [R-sig-phylo] R-sig-phylo Digest, Vol 186, Issue 3 Oscar Johnson
2023/07/21 Re: [R-sig-phylo] Correlation coefficient from a PGLS Emmanuel Paradis
2023/07/18 [R-sig-phylo] Correlation coefficient from a PGLS Lior Glick
2023/07/02 [R-sig-phylo] Ordination of discrete traits in threshBayes Stênio Ítalo Araújo Foerster
2023/06/28 [R-sig-phylo] kdetrees Vojtěch Zeisek
2023/06/24 Re: [R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file Felipe Rossetto
2023/06/24 Re: [R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file Liam J. Revell
2023/06/24 [R-sig-phylo] time axis in fan style phylogeny: arcs did not appear in eps file Felipe Rossetto
2023/06/22 [R-sig-phylo] Title: Error in make.simmap() function: argument of length 0 Souza Ferreira, Rachel
2023/06/01 Re: [R-sig-phylo] Including intraspecific variation (SE) in geiger::fitContinousMCMC Julien Clavel
2023/06/01 [R-sig-phylo] Including intraspecific variation (SE) in geiger::fitContinousMCMC Diogo B. Provete
2023/05/17 Re: [R-sig-phylo] Error in phytools rateshift Lior Glick
2023/05/17 Re: [R-sig-phylo] Error in phytools rateshift Liam J. Revell
2023/05/17 Re: [R-sig-phylo] Error in phytools rateshift Lior Glick
2023/05/16 Re: [R-sig-phylo] Error in phytools rateshift Liam J. Revell
2023/05/16 Re: [R-sig-phylo] Error in phytools rateshift Liam J. Revell
2023/05/16 [R-sig-phylo] Error in phytools rateshift Lior Glick
2023/04/18 Re: [R-sig-phylo] Using results of make.simmap to color edges by most likely state Rafael S Marcondes
2023/04/18 Re: [R-sig-phylo] Using results of make.simmap to color edges by most likely state Liam J. Revell
2023/04/18 [R-sig-phylo] Using results of make.simmap to color edges by most likely state Rafael S Marcondes
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Emmanuel Paradis
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Vojtěch Zeisek
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Vojtěch Zeisek
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Vojtěch Zeisek
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Klaus Schliep
2023/03/07 [R-sig-phylo] Parallelization in ape::dist.topo Martin R. Smith
2023/03/07 Re: [R-sig-phylo] Parallelization in ape::dist.topo Emmanuel Paradis
2023/03/06 [R-sig-phylo] Evolutionary Quantitative Genetics Workshop 2023 Joe Felsenstein
2023/03/06 [R-sig-phylo] Parallelization in ape::dist.topo Vojtěch Zeisek
2023/03/05 Re: [R-sig-phylo] Estimating the posterior prob of the ancestral states of two nodes Liam J. Revell
2023/03/05 [R-sig-phylo] Estimating the posterior prob of the ancestral states of two nodes Sishuo Wang
2023/03/01 [R-sig-phylo] Call for papers: Special Issue featuring linking micro- and macroevolution in Journal of Evolutionary Biology Masahito Tsuboi
2023/02/28 Re: [R-sig-phylo] NAMESPACE issue Liam J. Revell
2023/02/28 Re: [R-sig-phylo] NAMESPACE issue Kevin Arbuckle
2023/02/28 Re: [R-sig-phylo] NAMESPACE issue Emmanuel Paradis
2023/02/28 [R-sig-phylo] NAMESPACE issue Kevin Arbuckle
2023/02/10 [R-sig-phylo] PhD projects: 1. wildlife trade 2. Placenta evolution Isabella Capellini
2023/02/05 Re: [R-sig-phylo] Generating a matrix of interspecfic genetic distances Jarrett Phillips
2023/02/05 Re: [R-sig-phylo] Generating a matrix of interspecfic genetic distances Viechtbauer, Wolfgang (NP)
2023/02/05 [R-sig-phylo] Fwd: Extracting interspecific distances as a matrix Eliot Miller
2023/02/05 Re: [R-sig-phylo] Generating a matrix of interspecfic genetic distances Viechtbauer, Wolfgang (NP)
2023/02/04 [R-sig-phylo] Generating a matrix of interspecfic genetic distances Jarrett Phillips
2023/01/27 Re: [R-sig-phylo] Evolutionary Quantitative Genetics Workshop 2023 Joe Felsenstein
2023/01/27 [R-sig-phylo] Introduction to eco-phylogenetics and comparative analyses using R (ECPH02) Oliver Hooker
2023/01/24 [R-sig-phylo] Introduction to Multi’omics Data Analysis from Microbial Communities (MOMC01) Oliver Hooker
2023/01/19 [R-sig-phylo] Postdoc position on PCM of trait evolution in Stockholm/Sweden Masahito Tsuboi
2023/01/18 Re: [R-sig-phylo] Extract and summarise internal branch lengths for different samples Liam J. Revell
2023/01/18 Re: [R-sig-phylo] Extract and summarise internal branch lengths for different samples Liam J. Revell
2023/01/18 [R-sig-phylo] Extract and summarise internal branch lengths for different samples Jhonny Capichoni Massante
2023/01/17 [R-sig-phylo] phytools GitHub version Liam J. Revell
2023/01/17 Re: [R-sig-phylo] Extracting interspecific distances as a matrix Eliot Miller
2023/01/16 [R-sig-phylo] Extracting interspecific distances as a matrix Jarrett Phillips
2023/01/15 [R-sig-phylo] R phylogenetics workshop at UMass-Boston Liam J. Revell
2023/01/11 Re: [R-sig-phylo] Error in phytools - locate.fossil? Lindsey Dehaan
2023/01/11 Re: [R-sig-phylo] Error in phytools - locate.fossil? Liam J. Revell
2023/01/11 Re: [R-sig-phylo] Error in phytools - locate.fossil? Lindsey Dehaan
2023/01/10 Re: [R-sig-phylo] Error in phytools - locate.fossil? Liam J. Revell
2023/01/10 Re: [R-sig-phylo] Error in phytools - locate.fossil? Liam J. Revell
2023/01/10 [R-sig-phylo] Error in phytools - locate.fossil? Lindsey Dehaan
2023/01/10 Re: [R-sig-phylo] Counting and getting the age of cherries in a tree Ivan Magalhaes
2023/01/09 Re: [R-sig-phylo] Counting and getting the age of cherries in a tree Liam J. Revell
2023/01/09 [R-sig-phylo] Counting and getting the age of cherries in a tree Ivan Magalhaes
2022/12/14 Re: [R-sig-phylo] fitContinuous in Geiger Liam J. Revell
2022/12/14 [R-sig-phylo] fitContinuous in Geiger William Brown
2022/12/12 [R-sig-phylo] Stochastic differential equations with R school at Linkoping University, Sweden Krzysztof Bartoszek
2022/12/09 Re: [R-sig-phylo] Phylogenetic bubble plot Liam J. Revell
2022/12/09 [R-sig-phylo] Phylogenetic bubble plot Saleh Rahimlou
2022/11/17 Re: [R-sig-phylo] Estimating tip rates of molecular evolution Jacob Berv
2022/11/17 [R-sig-phylo] Estimating tip rates of molecular evolution Karla Shikev
2022/11/16 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete, trait Klaus Schliep
2022/11/14 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete trait O'Meara, Brian C
2022/11/14 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete trait roee maor
2022/11/13 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete, trait Jonas Eberle
2022/11/11 Re: [R-sig-phylo] R-sig-phylo Digest, Vol 178, Issue 5 Krzysztof Kozak
2022/11/10 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete trait Jonas Eberle
2022/11/10 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete trait (Krzysztof Bartoszek) Krzysztof Bartoszek
2022/11/09 Re: [R-sig-phylo] R-sig-phylo Digest, Vol 178, Issue 3 Krzysztof Kozak
2022/11/08 Re: [R-sig-phylo] ancestral state reconstruction with a complex discrete trait Liam J. Revell
2022/11/08 [R-sig-phylo] ancestral state reconstruction with a complex discrete trait Krzysztof Kozak
2022/11/03 [R-sig-phylo] max tree depth in ace and fitMk Martin Ramirez
2022/11/01 Re: [R-sig-phylo] Extracting intraspecific and interspecific distances from dist.dna() object Emmanuel Paradis
2022/10/20 [R-sig-phylo] Bayesian Phylogenetic Analysis Bruno Morais de Carvalho
2022/10/19 Re: [R-sig-phylo] reply to alternative error structures in PGLS jiyanzhu
2022/10/18 Re: [R-sig-phylo] Extracting intraspecific and interspecific distances from dist.dna() object Emmanuel Paradis
2022/10/18 [R-sig-phylo] Extracting intraspecific and interspecific distances from dist.dna() object Jarrett Phillips
2022/10/18 [R-sig-phylo] reply to alternative error structures in PGLS Luke Matthews
2022/10/17 [R-sig-phylo] Alternative error structures in PGLS jiyanzhu
2022/10/10 [R-sig-phylo] Announcement SSB Standalone meeting Alejandro Gonzalez Voyer
2022/09/28 [R-sig-phylo] [2nd announcement] "Bioinformatics: The Next 20 Years" (Oct 27) Emmanuel Paradis
2022/08/05 [R-sig-phylo] Fwd: Postdoc Position: Phylogenetic Climate Modeling & 3D Morphometrics David Bapst
2022/07/06 [R-sig-phylo] Interpreting stochastic character mapping results Lucas Eckert
2022/05/30 [R-sig-phylo] ONLINE COURSE – Introduction to Machine Learning and Deep Learning using R (IMDL03) Oliver Hooker
2022/05/28 [R-sig-phylo] Generalising the concept of cherries Graeme Lloyd
2022/05/23 [R-sig-phylo] MK1 vs MK2 with phylogenetic uncertainty Karla Shikev
2022/03/13 Re: [R-sig-phylo] Interpretation of Y~X vs. X~Y and estimation of Pagel's Lambda using PGLSR Ricardo Araújo
2022/02/20 [R-sig-phylo] wrong behaviour of is.monophyletic() with duplicated labels Emmanuel Paradis
2022/01/23 [R-sig-phylo] PGLS incorporating weights and estimate of effect size Alejandro Gonzalez Voyer
2022/01/23 [R-sig-phylo] ape::muscle doesn't work with Muscle5 Vojtěch Zeisek
2022/01/10 [R-sig-phylo] Introduction to eco-phylogenetics and comparative analyses using R (ECPH01) Oliver Hooker
2021/12/08 Re: [R-sig-phylo] issue with reading matrix in R package DispRity Oliver Betz
2021/12/06 Re: [R-sig-phylo] issue with reading matrix in R package DispRity Liam J. Revell
2021/12/06 Re: [R-sig-phylo] issue with reading matrix in R package DispRity Marguerite Butler
2021/12/06 [R-sig-phylo] issue with reading matrix in R package DispRity Oliver Betz
2021/11/27 Re: [R-sig-phylo] Substitution model rate matrix - how to read it? Emmanuel Paradis
2021/11/26 [R-sig-phylo] Substitution model rate matrix - how to read it? Martin Fikáček
2021/11/17 [R-sig-phylo] How to Report Results Across Multiple Trees? Trevor Bak
2021/11/04 Re: [R-sig-phylo] Simulate trait evolution with different phylogenetic signal along a tree Miguel Verdú del Campo
2021/11/04 Re: [R-sig-phylo] Simulate trait evolution with different phylogenetic signal along a tree Liam J. Revell
2021/11/04 [R-sig-phylo] Simulate trait evolution with different phylogenetic signal along a tree Miguel Verdú del Campo
2021/11/03 Re: [R-sig-phylo] Trimming protein alignment Vojtěch Zeisek
2021/11/02 Re: [R-sig-phylo] Trimming protein alignment Emmanuel Paradis
2021/11/02 Re: [R-sig-phylo] Trimming protein alignment Vojtěch Zeisek
2021/11/02 Re: [R-sig-phylo] Trimming protein alignment Vojtěch Zeisek
2021/11/02 Re: [R-sig-phylo] Trimming protein alignment Emmanuel Paradis
2021/11/02 [R-sig-phylo] Trimming protein alignment Vojtěch Zeisek
2021/11/01 [R-sig-phylo] Introduction to eco-phylogenetics and comparative analyses using R (ECPH01) Oliver Hooker
2021/10/21 Re: [R-sig-phylo] Irregularity in PGLS Slope Driven By Scope of Taxon Selection Julien Clavel
2021/10/20 Re: [R-sig-phylo] Irregularity in PGLS Slope Driven By Scope of Taxon Selection Julien Clavel
2021/10/19 Re: [R-sig-phylo] Question regarding PGLS in caper Alejandro Gonzalez Voyer
2021/10/19 Re: [R-sig-phylo] Question regarding PGLS in caper Julien Clavel
2021/10/18 [R-sig-phylo] Question regarding PGLS in caper Oliver Betz
2021/10/18 [R-sig-phylo] PhD Studentship (STUDENTS WORLDWIDE): Parental care evolution Isabella Capellini
2021/09/19 Re: [R-sig-phylo] Data normalization Jacob Berv
2021/09/19 [R-sig-phylo] Data normalization Ferenc Tibor Kagan
2021/09/17 Re: [R-sig-phylo] Ancestral state reconstruction, polytomies and the absence of branch lengths Emmanuel Paradis
2021/09/15 Re: [R-sig-phylo] Ancestral state reconstruction, polytomies and the absence of branch lengths Jacob Berv
2021/09/14 [R-sig-phylo] Ancestral state reconstruction, polytomies and the absence of branch lengths Diego Almeida-Silva
2021/09/08 [R-sig-phylo] FREE 1 DAY INTRO TO R AND R STUDIO (FIRR01) Oliver Hooker
2021/09/07 Re: [R-sig-phylo] dist.nodes Klaus Schliep
2021/09/06 Re: [R-sig-phylo] dist.nodes Emmanuel Paradis
2021/09/06 [R-sig-phylo] dist.nodes Nick Youngblut
2021/09/04 Re: [R-sig-phylo] Codifying missing data and polymorphic state of characters in the same matrix Liam J. Revell
2021/09/04 [R-sig-phylo] Codifying missing data and polymorphic state of characters in the same matrix Felipe Rossetto
2021/08/25 Re: [R-sig-phylo] hurdle models Krzysztof Bartoszek
2021/08/24 Re: [R-sig-phylo] hurdle models jonnations
2021/08/23 [R-sig-phylo] hurdle models Ted Stankowich
2021/07/30 Re: [R-sig-phylo] Introduction to eco-phylogenetics and comparative analyses using R Salvador Espada Hinojosa
2021/07/29 [R-sig-phylo] Introduction to eco-phylogenetics and comparative analyses using R Oliver Hooker
2021/07/08 Re: [R-sig-phylo] Model Selection and PGLS Cecile Ane
2021/07/07 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/07/05 Re: [R-sig-phylo] phylogenetic correlation analysis Oliver Betz
2021/07/04 Re: [R-sig-phylo] Model Selection and PGLS Julien Clavel
2021/07/04 Re: [R-sig-phylo] Model Selection and PGLS Simone Blomberg
2021/07/04 Re: [R-sig-phylo] Model Selection and PGLS Julien Clavel
2021/07/04 Re: [R-sig-phylo] Model Selection and PGLS Simone Blomberg
2021/07/04 Re: [R-sig-phylo] Model Selection and PGLS Theodore Garland
2021/07/03 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/07/02 Re: [R-sig-phylo] Model Selection and PGLS Simone Blomberg
2021/07/02 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/07/02 Re: [R-sig-phylo] Model Selection and PGLS Chris Organ
2021/07/01 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/07/01 Re: [R-sig-phylo] Model Selection and PGLS Cecile Ane
2021/06/30 Re: [R-sig-phylo] Model Selection and PGLS Theodore Garland
2021/06/30 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/06/29 Re: [R-sig-phylo] Model Selection and PGLS Cecile Ane
2021/06/29 Re: [R-sig-phylo] Model Selection and PGLS Theodore Garland
2021/06/29 Re: [R-sig-phylo] Model Selection and PGLS Theodore Garland
2021/06/29 Re: [R-sig-phylo] Model Selection and PGLS David Bapst
2021/06/29 Re: [R-sig-phylo] Model Selection and PGLS Nathan Upham
2021/06/28 Re: [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/06/28 Re: [R-sig-phylo] Model Selection and PGLS Nathan Upham
2021/06/28 [R-sig-phylo] Model Selection and PGLS Russell Engelman
2021/06/27 Re: [R-sig-phylo] Extracting sequences from DNAbin according to a condition Emmanuel Paradis
2021/06/27 Re: [R-sig-phylo] Using bind.tip and lapply on a multiPhylo object Russell Engelman
2021/06/27 [R-sig-phylo] Extracting sequences from DNAbin according to a condition Jarrett Phillips
2021/06/13 Re: [R-sig-phylo] phylogenetic correlation analysis Cecile Ane
2021/06/13 Re: [R-sig-phylo] phylogenetic correlation analysis Joe Felsenstein
2021/06/13 Re: [R-sig-phylo] phylogenetic correlation analysis Theodore Garland
2021/06/13 Re: [R-sig-phylo] phylogenetic correlation analysis Julien Clavel
2021/06/13 [R-sig-phylo] phylogenetic correlation analysis Oliver Betz
2021/06/11 Re: [R-sig-phylo] Degrees of Freedom in PGLS Theodore Garland
2021/06/11 [R-sig-phylo] Degrees of Freedom in PGLS Russell Engelman
2021/06/08 Re: [R-sig-phylo] Working with BTRTools or BTProcessR Gregory Mutumi

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