Dear all,

Our R package, ggtree, had been published in Methods in Ecology and
Evolution,
http://onlinelibrary.wiley.com/doi/10.1111/2041-210X.12628/abstract.

The package is designed for visualizing and annotating phylogenetic tree
using grammar of graphics implemented by ggplot2 package.

It had been used in several papers
<http://guangchuangyu.github.io/2016/08/ggtree-paper-published/> and in our
manuscript we provided comprehensive and reproducible example of using
ggtree to annotate phylogenetic tree with multiple layers.

Hope you find this paper and package useful.

Best wishes,
Guangchuang
-- 
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Guangchuang Yu, PhD Candidate
State Key Laboratory of Emerging Infectious Diseases
School of Public Health
The University of Hong Kong
Hong Kong SAR, China
www: https://guangchuangyu.github.io
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