Dear Nick.
When you encounter a bug or issue in ape have you tried emailing
Emmanuel (emmanuel.para...@ird.fr) or this list? Usually he is pretty
responsive.
All the best, Liam
Liam J. Revell
University of Massachusetts Boston
Universidad Católica de la Ssma Concepción
Web & phytools:
http://faculty.umb.edu/liam.revell/, http://www.phytools.org,
http://blog.phytools.org
Academic Director UMass Boston Chile Abroad:
https://www.umb.edu/academics/caps/international/biology_chile
Excess mortality & COVID-19 explorer web application:
https://liamrevell.github.io/excess-mortality-explorer.html
On 12/3/2020 9:44 AM, Nick Youngblut wrote:
EXTERNAL SENDER
Hello!
I keep running into bugs with the ape R package, and I usually just work around the issues (eg., using
another phylogeny R package) because I don’t know of a good way of submitting bug reports to the package
developer(s). While
https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fape-package.ird.fr%2F&data=04%7C01%7Cliam.revell%40umb.edu%7Ccd7c756b843a4c61842f08d8979a0f0c%7Cb97188711ee94425953c1ace1373eb38%7C0%7C1%7C637426035237836148%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=q98folhy9dOyyQEvdAFwO8ZWsrcq56cgfF1DPAzSpJM%3D&reserved=0
<https://nam10.safelinks.protection.outlook.com/?url=http%3A%2F%2Fape-package.ird.fr%2F&data=04%7C01%7Cliam.revell%40umb.edu%7Ccd7c756b843a4c61842f08d8979a0f0c%7Cb97188711ee94425953c1ace1373eb38%7C0%7C1%7C637426035237836148%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=q98folhy9dOyyQEvdAFwO8ZWsrcq56cgfF1DPAzSpJM%3D&reserved=0>
is useful, it doesn’t allow users to provide feedback about ape (or the other R packages listed). It would
be great to have the ape package source code on GitHub, and that will probably make future development of the
source code easier (eg., allowing PRs from other developers).
Best,
Nick
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