Dear Peter, On Mon, Jul 26, 2010 at 3:19 PM, Peter Schmidtke <[email protected]> wrote: > Hey Greg, > I already compiled boost using the instructions from the rdkit wiki. Anyway, > recompiling rdkit completely solves this problem. > But that wasn't easy enough. Next error : > [ 84%] Built target rdSLNParse > [ 85%] Building CXX object ... snip ... > /root/pool/include/boost/type_traits/detail/cv_traits_impl.hpp:37: internal > compiler error: in make_rtl_for_nonlocal_decl, at cp/decl.c:5067 > Please submit a full bug report, > with preprocessed source if appropriate. > See <URL:http://bugzilla.redhat.com/bugzilla> for instructions. > Preprocessed source stored into /tmp/ccgSaXge.out file, please attach this > to your bugreport. > make[2]: *** [Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o] > Error 1 > make[1]: *** [Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/all] Error 2 > make: *** [all] Error 2 > > > I saw this error online also, and people suggested to add > the BOOST_PYTHON_NO_PY_SIGNATURES > flag, and recompile boost, which is what I did, but no effect on this > error.
Ah... it's not boost that you need to recompile. Add the following to the top of $RDBASE/Code/GraphMol/Wrap/EditableMol.cpp: #define BOOST_PYTHON_NO_PY_SIGNATURES (related post: http://www.mail-archive.com/[email protected]/msg01178.html) > Someone has an idea? Are there plans to come around these boost dependencies > in rdkit...it's a real showstopper on older systems...real pain to get it > installed :( No plans to stop using boost, sorry. The fact that the RDKit uses such a high-quality, well-documented library (that is maintained by someone else) is actually one of the strengths of the project. The problem you describe above is a bug in gcc, not a problem with boost. -greg ------------------------------------------------------------------------------ The Palm PDK Hot Apps Program offers developers who use the Plug-In Development Kit to bring their C/C++ apps to Palm for a share of $1 Million in cash or HP Products. Visit us here for more details: http://ad.doubleclick.net/clk;226879339;13503038;l? http://clk.atdmt.com/CRS/go/247765532/direct/01/ _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
