On Mon, Jun 13, 2011 at 7:52 PM, JP <[email protected]> wrote: > Now that is a useful command to get hold of... > > libRDGeneral.so.1 => /share/apps/RDKit_2011_03_2/lib/libRDGeneral.so.1 > (0x00002afc81158000) > libRDBoost.so.1 => /share/apps/RDKit_2011_03_2/lib/libRDBoost.so.1 > (0x00002afc81399000) > libboost_python.so.1.46.1 => > /share/apps/boost_1_46_1/lib/libboost_python.so.1.46.1 > (0x00002afc81777000) > libstdc++.so.6 => /usr/local/lib64/libstdc++.so.6 (0x00002afc819c9000) > libm.so.6 => /lib64/libm.so.6 (0x00002afc81ce6000) > libgcc_s.so.1 => /usr/local/lib64/libgcc_s.so.1 (0x00002afc81f69000) > libc.so.6 => /lib64/libc.so.6 (0x00002afc8217f000) > libutil.so.1 => /lib64/libutil.so.1 (0x00002afc824d6000) > libpthread.so.0 => /lib64/libpthread.so.0 (0x00002afc826d9000) > libdl.so.2 => /lib64/libdl.so.2 (0x00002afc828f5000) > librt.so.1 => /lib64/librt.so.1 (0x00002afc82af9000) > /lib64/ld-linux-x86-64.so.2 (0x0000003240a00000)
Those look fine; you are using the correct boost library. > I am assuming that since you tacked away from sqlite3, you do not > think any of the errors posted earlier where relevant.... I guessed that the problem was with boost since the places where you are getting errors could both be explained by changes to the random-number generator, which have happened in the past with boost version changes. Since the tests pass with 1.46 for me, that's not likely the case here. When I first read your response to Kirk, I thought that the sqlite errors were a result of running the build script when the dbs had already been built, so I didn't find them alarming. [Aside: the instruction to create the databases shouldn't have been in the build instructions anymore anyway; I updated the wiki] Now I realize that this actually probably is the problem and I was making things more complicated than they should be. Try removing the two test databases and then rebuilding them: rm $RDBASE/Data/RDTests.sqlt rm $RDBASE/Data/RDData.sqlt sqlite3 $RDBASE/Data/RDTests.sqlt < $RDBASE/rdkit/Dbase/test_data/RDTests.sqlite sqlite3 $RDBASE/Data/RDData.sqlt < $RDBASE/rdkit/Dbase/test_data/RDData.sqlite Then re-run those tests. -greg ------------------------------------------------------------------------------ EditLive Enterprise is the world's most technically advanced content authoring tool. Experience the power of Track Changes, Inline Image Editing and ensure content is compliant with Accessibility Checking. http://p.sf.net/sfu/ephox-dev2dev _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
