Messages by Date
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2019/11/15
Re: [Rdkit-discuss] RD Kit Cartridge setting do_chiral_sss flag with Java JDBC
Greg Landrum
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2019/11/15
Re: [Rdkit-discuss] RD Kit Cartridge setting do_chiral_sss flag with Java JDBC
Webster Homer
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2019/11/15
Re: [Rdkit-discuss] RD Kit Cartridge setting do_chiral_sss flag with Java JDBC
Webster Homer
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2019/11/15
Re: [Rdkit-discuss] rdkit cartridge stereo search is inconsistent
Greg Landrum
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2019/11/15
Re: [Rdkit-discuss] RD Kit Cartridge setting do_chiral_sss flag with Java JDBC
Greg Landrum
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2019/11/15
[Rdkit-discuss] Second call for mmpdb funding
Andrew Dalke
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2019/11/14
[Rdkit-discuss] rdkit cartridge stereo search is inconsistent
Webster Homer
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2019/11/14
[Rdkit-discuss] RD Kit Cartridge setting do_chiral_sss flag with Java JDBC
Webster Homer
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2019/11/14
Re: [Rdkit-discuss] numpy array to bit vector
Thomas Evangelidis
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2019/11/14
Re: [Rdkit-discuss] numpy array to bit vector
Greg Landrum
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2019/11/14
Re: [Rdkit-discuss] numpy array to bit vector
Maciek Wójcikowski
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2019/11/14
Re: [Rdkit-discuss] numpy array to bit vector
Greg Landrum
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2019/11/14
Re: [Rdkit-discuss] numpy array to bit vector
Thomas Evangelidis
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2019/11/13
Re: [Rdkit-discuss] Questions about adding and removing hydrogen atoms
Greg Landrum
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2019/11/13
Re: [Rdkit-discuss] Random (?) highlighting in pandas dataframe
Greg Landrum
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2019/11/13
Re: [Rdkit-discuss] Random (?) highlighting in pandas dataframe
Markus Heller
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2019/11/13
Re: [Rdkit-discuss] Adjust protonation state of molecules
Czodrowski, Paul
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2019/11/13
[Rdkit-discuss] Random (?) highlighting in pandas dataframe
Markus Heller
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2019/11/13
[Rdkit-discuss] Adjust protonation state of molecules
Markus Heller
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2019/11/13
[Rdkit-discuss] Questions about adding and removing hydrogen atoms
topgunhaides .
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Thomas Strunz
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2019/11/12
Re: [Rdkit-discuss] Different InChI: RDKit Knime Vs RDKit Python
Jan Holst Jensen
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Peter St. John
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Greg Landrum
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Thomas Strunz
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2019/11/12
[Rdkit-discuss] Different InChI: RDKit Knime Vs RDKit Python
Christos Kannas
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Greg Landrum
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Thomas Strunz
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2019/11/12
Re: [Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Greg Landrum
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2019/11/12
[Rdkit-discuss] Anaconda installation without hard dependency on Intel MKl (windows)
Thomas Strunz
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2019/11/07
Re: [Rdkit-discuss] Download the file of zdd.sdf.gz
Peng Yu
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2019/11/06
Re: [Rdkit-discuss] Download the file of zdd.sdf.gz
Greg Landrum
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2019/11/06
Re: [Rdkit-discuss] Molecules not rendere in Dataframe
Greg Landrum
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2019/11/06
[Rdkit-discuss] Download the file of zdd.sdf.gz
Peng Yu
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2019/11/06
[Rdkit-discuss] What is the difference between rdkit and openbabel?
Peng Yu
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2019/11/06
Re: [Rdkit-discuss] Explicit H in substructure searches
Markus Heller
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2019/11/06
Re: [Rdkit-discuss] Explicit H in substructure searches
Markus Heller
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2019/11/06
Re: [Rdkit-discuss] rdkit.ML.Scoring?
Markus Metz
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2019/11/06
Re: [Rdkit-discuss] rdkit.ML.Scoring?
Greg Landrum
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2019/11/06
[Rdkit-discuss] Hydrogens involved in "stereochemistry" are not removed by RemoveHs()
Ivan Tubert-Brohman
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2019/11/06
[Rdkit-discuss] rdkit.ML.Scoring?
Markus Metz
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2019/11/06
Re: [Rdkit-discuss] Wiener Index Calculation
Greg Landrum
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2019/11/06
[Rdkit-discuss] Wiener Index Calculation
Goutam Mukherjee
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2019/11/06
Re: [Rdkit-discuss] Somthing wrong with MolDraw2DSVG
Paolo Tosco
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2019/11/05
Re: [Rdkit-discuss] Explicit H in substructure searches
Greg Landrum
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2019/11/05
Re: [Rdkit-discuss] Explicit H in substructure searches
Paolo Tosco
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2019/11/05
Re: [Rdkit-discuss] Building RDKit Java Wrappers
Paolo Tosco
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2019/11/05
[Rdkit-discuss] Building RDKit Java Wrappers
Jenny h
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2019/11/05
[Rdkit-discuss] Explicit H in substructure searches
Markus Heller
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2019/11/05
Re: [Rdkit-discuss] SMARTS Query Normalization?
Greg Landrum
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2019/11/05
Re: [Rdkit-discuss] Molecules not rendere in Dataframe
Jan Halborg Jensen
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2019/11/04
Re: [Rdkit-discuss] Molecules not rendere in Dataframe
Jan Halborg Jensen
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2019/11/04
Re: [Rdkit-discuss] Molecules not rendere in Dataframe
Jennifer Wei via Rdkit-discuss
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2019/11/04
[Rdkit-discuss] Compiling Java Wrappers
Jenny h
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2019/11/04
[Rdkit-discuss] Molecules not rendere in Dataframe
Markus Heller
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2019/11/04
Re: [Rdkit-discuss] SMARTS Query Normalization?
Webster Homer
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2019/11/04
Re: [Rdkit-discuss] AttributeError in loading Crippen module
Lorenzo Fabbri via Rdkit-discuss
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2019/11/04
[Rdkit-discuss] AttributeError in loading Crippen module
Goutam Mukherjee
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2019/11/03
[Rdkit-discuss] Somthing wrong with MolDraw2DSVG
Shengde
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2019/11/03
[Rdkit-discuss] Somthing wrong with MolDraw2DSVG
Shengde
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2019/11/01
Re: [Rdkit-discuss] SMARTS Query Normalization?
Greg Landrum
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2019/11/01
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Mike Mazanetz
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2019/11/01
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Greg Landrum
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2019/11/01
[Rdkit-discuss] Problem using AddMoleculeColumnToFrame on Google Colab
Jan Halborg Jensen
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2019/10/31
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Markus Heller
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2019/10/31
[Rdkit-discuss] How to plot similarity maps side by side
Markus Heller
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2019/10/31
Re: [Rdkit-discuss] failed mols in converting SMILES to Pandas dataframe Molecule
Markus Heller
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2019/10/31
[Rdkit-discuss] SMARTS Query Normalization?
Webster Homer
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2019/10/31
Re: [Rdkit-discuss] failed mols in converting SMILES to Pandas dataframe Molecule
Mike Mazanetz
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2019/10/31
Re: [Rdkit-discuss] failed mols in converting SMILES to Pandas dataframe Molecule
Fiorella Ruggiu
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2019/10/31
[Rdkit-discuss] failed mols in converting SMILES to Pandas dataframe Molecule
Mike Mazanetz
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2019/10/31
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Mike Mazanetz
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2019/10/31
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Taka Seri
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2019/10/31
Re: [Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Jan Halborg Jensen
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2019/10/31
[Rdkit-discuss] calculating molecular properties on a Pandas dataframe Molecule
Mike Mazanetz
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2019/10/30
Re: [Rdkit-discuss] Incorrect Aromaticity?
Hao
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2019/10/30
Re: [Rdkit-discuss] Incorrect Aromaticity?
Ivan Tubert-Brohman
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2019/10/30
Re: [Rdkit-discuss] Incorrect Aromaticity?
Dan Nealschneider
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2019/10/30
[Rdkit-discuss] Incorrect Aromaticity?
Hao
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2019/10/30
Re: [Rdkit-discuss] Stereochemistry in rdkit
Greg Landrum
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2019/10/30
Re: [Rdkit-discuss] fingerprint a molecule with pseudoatoms denoted by 'Du'
SCHEEN Jenke
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2019/10/30
Re: [Rdkit-discuss] fingerprint a molecule with pseudoatoms denoted by 'Du'
Paolo Tosco
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2019/10/30
[Rdkit-discuss] fingerprint a molecule with pseudoatoms denoted by 'Du'
SCHEEN Jenke
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2019/10/30
Re: [Rdkit-discuss] how to set the stereochemistry of a molecule
Alfredo Quevedo
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2019/10/30
Re: [Rdkit-discuss] how to set the stereochemistry of a molecule
Greg Landrum
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2019/10/30
Re: [Rdkit-discuss] Stereochemistry in rdkit
Lukas Pravda
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2019/10/30
Re: [Rdkit-discuss] how to set the stereochemistry of a molecule
Alfredo Quevedo
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2019/10/30
Re: [Rdkit-discuss] 2019.09.1 RDKit Release
Francois Berenger
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2019/10/29
Re: [Rdkit-discuss] how to set the stereochemistry of a molecule
Greg Landrum
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2019/10/29
Re: [Rdkit-discuss] Stereochemistry in rdkit
Greg Landrum
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2019/10/29
Re: [Rdkit-discuss] how to set the stereochemistry of a molecule
Hongbin Yang
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2019/10/29
[Rdkit-discuss] how to set the stereochemistry of a molecule
Alfredo Quevedo
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2019/10/29
[Rdkit-discuss] How to set stereochemistry of a molecule
Alfredo Quevedo
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2019/10/29
[Rdkit-discuss] Stereochemistry in rdkit
Lukas Pravda
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2019/10/25
Re: [Rdkit-discuss] 2019.09.1 RDKit Release
Greg Landrum
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2019/10/25
Re: [Rdkit-discuss] 2019.09.1 RDKit Release
Greg Landrum
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2019/10/25
Re: [Rdkit-discuss] 2019.09.1 RDKit Release
Hongbin Yang
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2019/10/25
[Rdkit-discuss] 2019.09.1 RDKit Release
Greg Landrum
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2019/10/24
Re: [Rdkit-discuss] parsing reactions for reactants, agents, products
Benjamin Datko
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2019/10/23
Re: [Rdkit-discuss] Problem with getting hybridization from mol object
Greg Landrum
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2019/10/23
Re: [Rdkit-discuss] Getting 3d coordinates from mol object
Navid Shervani-Tabar
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2019/10/23
[Rdkit-discuss] Getting 3d coordinates from mol object
Navid Shervani-Tabar
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2019/10/23
Re: [Rdkit-discuss] Problem with getting hybridization from mol object
Navid Shervani-Tabar
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2019/10/23
Re: [Rdkit-discuss] Problem with getting hybridization from mol object
Greg Landrum
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2019/10/23
Re: [Rdkit-discuss] Problem with getting hybridization from mol object
Navid Shervani-Tabar
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2019/10/22
Re: [Rdkit-discuss] parsing reactions for reactants, agents, products
Greg Landrum
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2019/10/22
Re: [Rdkit-discuss] Problem with getting hybridization from mol object
Dan Nealschneider
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2019/10/22
[Rdkit-discuss] Problem with getting hybridization from mol object
Navid Shervani-Tabar
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2019/10/22
Re: [Rdkit-discuss] parsing reactions for reactants, agents, products
Benjamin Datko
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2019/10/21
Re: [Rdkit-discuss] parsing reactions for reactants, agents, products
Hongbin Yang
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2019/10/21
[Rdkit-discuss] parsing reactions for reactants, agents, products
Benjamin Datko
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2019/10/17
[Rdkit-discuss] Beta of the 2019.09 release available
Greg Landrum
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2019/10/17
Re: [Rdkit-discuss] AlignMol and GetBestRMS
Paolo Tosco
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2019/10/17
Re: [Rdkit-discuss] AlignMol and GetBestRMS
Peter S. Shenkin
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2019/10/17
Re: [Rdkit-discuss] AlignMol and GetBestRMS
Peter S. Shenkin
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2019/10/17
Re: [Rdkit-discuss] AlignMol and GetBestRMS
Omar H94
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2019/10/17
[Rdkit-discuss] AlignMol and GetBestRMS
Stamatia Zavitsanou
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2019/10/16
Re: [Rdkit-discuss] missing MolFromSmiles error output in Jupyter
Greg Landrum
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2019/10/16
Re: [Rdkit-discuss] missing MolFromSmiles error output in Jupyter
Dmitri Maziuk via Rdkit-discuss
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2019/10/16
Re: [Rdkit-discuss] Setting atom type
Luan Carvalho Martins
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2019/10/16
Re: [Rdkit-discuss] Setting atom type
Paolo Tosco
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2019/10/16
[Rdkit-discuss] Setting atom type
Luan Carvalho Martins
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2019/10/16
Re: [Rdkit-discuss] identify and setformal charge of carboxylic acid
Paolo Tosco
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2019/10/16
Re: [Rdkit-discuss] missing MolFromSmiles error output in Jupyter
Andrew Dalke
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2019/10/16
[Rdkit-discuss] identify and setformal charge of carboxylic acid
Jorgen Simonsen
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2019/10/16
Re: [Rdkit-discuss] missing MolFromSmiles error output in Jupyter
Téletchéa Stéphane
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2019/10/16
[Rdkit-discuss] missing MolFromSmiles error output in Jupyter
Andrew Dalke
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2019/10/15
Re: [Rdkit-discuss] SDMolSupplier, next()
Greg Landrum
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2019/10/15
Re: [Rdkit-discuss] SDMolSupplier, next()
Paolo Tosco
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2019/10/15
[Rdkit-discuss] SDMolSupplier, next()
Jean-Marc Nuzillard
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2019/10/15
Re: [Rdkit-discuss] RDKit Num Rotors descriptors?
Geoffrey Hutchison
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2019/10/15
Re: [Rdkit-discuss] RDKit Num Rotors descriptors?
Ivan Tubert-Brohman
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2019/10/15
Re: [Rdkit-discuss] RDKit Num Rotors descriptors?
Ivan Tubert-Brohman
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2019/10/15
[Rdkit-discuss] RDKit Num Rotors descriptors?
Geoffrey Hutchison
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2019/10/12
Re: [Rdkit-discuss] Compatibility with pylint in vscode
Hongbin Yang
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2019/10/11
Re: [Rdkit-discuss] Compatibility with pylint in vscode
Paolo Tosco
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2019/10/11
[Rdkit-discuss] Compatibility with pylint in vscode
Hongbin Yang
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2019/10/10
Re: [Rdkit-discuss] Require your help on 'Weights' syntax
Greg Landrum
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2019/10/10
[Rdkit-discuss] Require your help on 'Weights' syntax
Yurie Kim
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2019/10/09
Re: [Rdkit-discuss] distinguishing macrocyclic molecules
Greg Landrum
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Mike Mazanetz
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Paolo Tosco
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Paolo Tosco
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Mike Mazanetz
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2019/10/09
Re: [Rdkit-discuss] distinguishing macrocyclic molecules
Ivan Tubert-Brohman
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2019/10/09
Re: [Rdkit-discuss] distinguishing macrocyclic molecules
David Cosgrove
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Scalfani, Vincent
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2019/10/09
Re: [Rdkit-discuss] distinguishing macrocyclic molecules
Ivan Tubert-Brohman
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2019/10/09
Re: [Rdkit-discuss] distinguishing macrocyclic molecules
Omar H94
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2019/10/09
[Rdkit-discuss] distinguishing macrocyclic molecules
Thomas Evangelidis
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2019/10/09
Re: [Rdkit-discuss] Inchi which flavour??
Maciek Wójcikowski
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2019/10/08
Re: [Rdkit-discuss] Inchi which flavour??
Greg Landrum
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2019/10/08
[Rdkit-discuss] change SMILES based on charge state of molecule
Jorgen Simonsen
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2019/10/08
Re: [Rdkit-discuss] regarding hydrogens from SMILES
Jorgen Simonsen
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2019/10/08
Re: [Rdkit-discuss] regarding hydrogens from SMILES
Sereina
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2019/10/08
[Rdkit-discuss] Inchi which flavour??
mikem
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2019/10/08
Re: [Rdkit-discuss] regarding hydrogens from SMILES
Paolo Tosco
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2019/10/08
Re: [Rdkit-discuss] regarding hydrogens from SMILES
Jorgen Simonsen
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2019/10/08
Re: [Rdkit-discuss] regarding hydrogens from SMILES
Paolo Tosco
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2019/10/08
[Rdkit-discuss] regarding hydrogens from SMILES
Jorgen Simonsen
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2019/10/07
Re: [Rdkit-discuss] Get full matrix from GetEuclideanDistMat
Greg Landrum
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2019/10/07
Re: [Rdkit-discuss] how to handle metallocenes?
mikem
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2019/10/07
Re: [Rdkit-discuss] how to handle metallocenes?
Michal Krompiec
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2019/10/07
Re: [Rdkit-discuss] how to handle metallocenes?
Greg Landrum
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2019/10/07
[Rdkit-discuss] how to handle metallocenes?
Mike Mazanetz
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2019/10/07
Re: [Rdkit-discuss] Saving chains from PDB file
Chris Swain via Rdkit-discuss
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2019/10/07
Re: [Rdkit-discuss] Saving chains from PDB file
Maciek Wójcikowski
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2019/10/07
Re: [Rdkit-discuss] Saving chains from PDB file
Téletchéa Stéphane
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2019/10/06
Re: [Rdkit-discuss] Capturing offending atom in error message
Greg Landrum
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2019/10/06
Re: [Rdkit-discuss] how to handle a chiral flag failure
Greg Landrum
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2019/10/05
Re: [Rdkit-discuss] Saving chains from PDB file
Dimitri Maziuk via Rdkit-discuss
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2019/10/05
Re: [Rdkit-discuss] Saving chains from PDB file
Chris Swain via Rdkit-discuss
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2019/10/05
Re: [Rdkit-discuss] Saving chains from PDB file
Maciek Wójcikowski
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2019/10/05
Re: [Rdkit-discuss] Saving chains from PDB file
Paolo Tosco
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2019/10/05
[Rdkit-discuss] Saving chains from PDB file
Chris Swain via Rdkit-discuss
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2019/10/04
[Rdkit-discuss] how to handle a chiral flag failure
Mike Mazanetz
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2019/10/04
Re: [Rdkit-discuss] Capturing offending atom in error message
Jan Halborg Jensen
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2019/10/04
Re: [Rdkit-discuss] SubstructMatch of identical Mols returns different results
Ondrej Gutten via Rdkit-discuss
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2019/10/04
[Rdkit-discuss] Capturing offending atom in error message
Chaya Stern
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2019/10/04
[Rdkit-discuss] Get full matrix from GetEuclideanDistMat
Lorenzo Fabbri via Rdkit-discuss
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2019/10/03
Re: [Rdkit-discuss] Boc Deprotection
Hongbin Yang
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2019/10/03
Re: [Rdkit-discuss] Boc Deprotection
Sean Stromberg
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2019/10/03
Re: [Rdkit-discuss] SubstructMatch of identical Mols returns different results
Andrew Dalke
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2019/10/03
[Rdkit-discuss] SubstructMatch of identical Mols returns different results
Ondrej Gutten via Rdkit-discuss
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2019/10/03
Re: [Rdkit-discuss] Fwd: sending warnings to stderr/stdout to files
Mike Mazanetz
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2019/10/02
Re: [Rdkit-discuss] Boc Deprotection
Hongbin Yang
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2019/10/02
[Rdkit-discuss] Boc Deprotection
Sean Stromberg
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2019/10/02
Re: [Rdkit-discuss] Issue with SmilesMolSupplier using FreeSolv data
Greg Landrum
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2019/10/01
[Rdkit-discuss] Issue with SmilesMolSupplier using FreeSolv data
Guillaume GODIN
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2019/09/30
[Rdkit-discuss] I updated the rdkit brew install recipe
Francois Berenger
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2019/09/27
Re: [Rdkit-discuss] Issue with Chirality
Guillaume GODIN
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2019/09/27
Re: [Rdkit-discuss] Issue with Chirality
Greg Landrum
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2019/09/27
Re: [Rdkit-discuss] AssignStereochemistry confusion
Greg Landrum
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2019/09/27
Re: [Rdkit-discuss] AssignStereochemistry confusion
Zoltan Takacs
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2019/09/27
Re: [Rdkit-discuss] Issue with Chirality
Dan Nealschneider
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2019/09/27
Re: [Rdkit-discuss] AssignStereochemistry confusion
Dan Nealschneider
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2019/09/26
Re: [Rdkit-discuss] Bug in Chem.SetDihedralDeg ?
Paolo Tosco
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2019/09/26
[Rdkit-discuss] Bug in Chem.SetDihedralDeg ?
thomas.fox
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2019/09/25
Re: [Rdkit-discuss] Fwd: sending warnings to stderr/stdout to files
Lukas Pravda
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2019/09/25
Re: [Rdkit-discuss] Fwd: sending warnings to stderr/stdout to files
Brian Lee