All but two tests failing (RDKit 2011_03_2) ... Attaching logs... 71 - pythonTestDirML (Failed) 76 - pythonTestDirChem (Failed)
Should I be worried ? Of course I should - I guess the real question is -- are these errors known? On 12 June 2011 15:51, Greg Landrum <[email protected]> wrote: > On Sunday, June 12, 2011, JP <[email protected]> wrote: > > This will make RDKit work ... but...Won't this presumably break any > system dependencies which will need the *old* versions of the /usr/lib64 > contained libraries? > > I don't think so. I believe that the c++ libs should be backwards > compatible. > > -greg > > > > > > > > > > > Jean-Paul EbejerEarly Stage Researcher > > InhibOx LtdPembroke House36-37 Pembroke StreetOxford > > > > OX1 1BPUK > > (+44 / 0) 1865 262 034 > > > > > > > > > > This email and any files transmitted with it are confidential and > intended solely for the use of the individual or entity to whom they are > addressed. Any unauthorised dissemination or copying of this email or its > attachments, and any use or disclosure of any information contained in them, > is strictly prohibited and may be illegal. If you have received this email > in error please notify the sender and delete all copies from your system. > > > > We and our group companies accept no liability or responsibility for > personal emails or emails unconnected with our business. > > > > Internet communications including emails and access and use of web sites > cannot be guaranteed to be secure or error free as information can be > intercepted, corrupted, lost or arrive late. Furthermore, while we have > taken steps to control the spread of viruses on our systems, we cannot > guarantee that this email and any files transmitted with it are virus free. > No liability is accepted for any errors, omissions, interceptions, corrupted > mail, lost communications or late delivery arising as a result of receiving > this message via the Internet or for any virus that may be contained in it. > > > > > > > > > > > > On 11 June 2011 05:37, Greg Landrum <[email protected]> wrote: > > > > > > On Fri, Jun 10, 2011 at 9:54 PM, Robert DeLisle <[email protected]> > wrote: > >> > >> For my own education, could this be related to having upgraded GCC > through > >> the CentOS install instructions, but using the old Python? The new > version > >> of RDKit would have been built with the newer GCC but the old Python may > not > >> refer to the correct libraries? > > > > The error message points to /usr/lib64/libstdc++.so.6, which is (I > > guess) the system version of libstdc++. The solution to the problem is > > probably to figure out where the version of g++ that you built and > > installed put its libraries (probably somewhere in /usr/local ?) and > > make sure that is in your LD_LIBRARY_PATH *before* /usr/lib64. > > > > -greg > > > > >
fail_test_output.log
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