Hello
I'm using samtools version 1.1 and every time I give the folowing command:
samtools mpileup -C 50 -ug -f PSP/data/hg19/hg19.fa
PSP/data/PSP10/PSP10.recal.bam > PSP/data/PSP10/PSP10_sam.bcf
I get the following message:
[mpileup] 1 samples in 1 input files
<mpileup> Set max per-file depth to 8000
witch I don't get with previous versions.
Thanks in advance
David
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