Re: [base] analysis table already exists

2008-01-09 Thread Nicklas Nordborg
one thing that comes to my mind and that could explain both the 'table exists' error and the duplication issue is that each job is for some reason executed twice (and at the same time). It shouldn't happen, but I remember that we had some problems when running test programs and

Re: [base] analysis table already exists

2008-01-09 Thread Bob MacCallum
Nicklas Nordborg writes: I'll post back here again if we see duplication again and can recreate the conditions. In the meantime, all seems OK again. I think this is a problem with the how the job queue start jobs. We'll check if we can reproduce it here as well. Having

Re: [base] how to save filter presets?

2008-01-09 Thread Bob MacCallum
Thanks for this. The column restriction formula type seems to work for me here. Nicklas Nordborg writes: Bob MacCallum wrote: Hi, Could someone just point me roughly in the direction of how to save an analysis filter preset? I can't seem to figure it out myself... The

[base] annotation-based analysis filters

2008-01-09 Thread Bob MacCallum
Hello all, Are there any plans to allow filtering or transforming (e.g. averaging) over annotation values (e.g. brain, heart, liver) through the standard analysis tools in BASE2, or is this best done via plugins? I don't see any tickets about this. There are some old mailing list posts of mine