Re: [Bioc-devel] nebbiolo1 - build report

To: Kristian Ullrich ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] nebbiolo1 - build report * This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. * As for the error you will see when today's report gets published it's

Re: [Bioc-devel] nebbiolo1 - build report

As for the error you will see when today's report gets published it's caused by the recent move of the pairwiseAlignment stuff from Biostrings to the new pwalign package. I fixed it in MSA2dist 1.7.6 so it will go away in tomorrow's report. Please resync your GitHub repo with

Re: [Bioc-devel] nebbiolo1 - build report

Hi Kristian, I believe that this is because the new report didn't get published yet so the links in the email you received still points to yesterday's report. We're investigating. Best, H. On 4/24/24 09:10, Kristian Ullrich wrote: > Hi, > > I just got an email from bbs: > > Hi MSA2dist

[Bioc-devel] nebbiolo1 - build report

Hi, I just got an email from bbs: Hi MSA2dist maintainer, According to the Multiple platform build/check report for BioC 3.19, the MSA2dist package has the following problem(s): o ERROR for 'R CMD INSTALL' on nebbiolo1. See the details here:

Re: [Bioc-devel] "scry" build report error

-devel on behalf of Kelly Street Sent: Tuesday, September 26, 2023 6:38 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] "scry" build report error * This email originates from a sender outside of CUNY. Verify the sender before replying or clicking on links and attachments. *

[Bioc-devel] "scry" build report error

Hello all, We are getting a strange error in the recent build report for our package "scry" and I am wondering if anyone has encountered this issue before. In the vignette, we use a dataset from the DuoClustering2018 package, which

[Bioc-devel] Many build report errors due to some regressions introduced in S4Vectors

Hi, While making some changes to S4Vectors, I introduced a couple of regressions that break many packages on today's devel report: https://bioconductor.org/checkResults/3.15/bioc-LATEST/ One is an infinite circular recursion error that looks like this: C stack usage 7977524 is too

[Bioc-devel] Release build report

Please be advised, the Bioconductor RELEASE_3_12 build report has not been updated since Monday Feb 22. We have identified the issue and are working on the resolution. We appreciate your patience. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center

Re: [Bioc-devel] No build report

Thank you Lori! From: Shepherd, Lori Sent: Wednesday, April 29, 2020 11:50 AM To: Cao, Quy ; Herv� Pag�s ; Nitesh Turaga ; Bioc-devel Subject: Re: [Bioc-devel] No build report There are only automatic emails when a package fails. You can get the daily build reports by going to http

Re: [Bioc-devel] No build report

Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Cao, Quy Sent: Wednesday, April 29, 2020 11:48 AM To: Herv� Pag�s ; Shepherd, Lori ; Nitesh Turaga ; Bioc-devel Subject: RE: [Bioc-devel] No build re

Re: [Bioc-devel] No build report

; Nitesh Turaga ; Bioc-devel Subject: Re: [Bioc-devel] No build report Hi Quy, Are you looking at the right place? Build report for BioC 3.11 is here https://bioconductor.org/checkResults/3.11/bioc-LATEST/ and I see PERFect there, since at least Monday. Best, H. On 4/29/20 08:01, Cao, Quy

Re: [Bioc-devel] No build report

sh Turaga mailto:nturaga.b...@gmail.com>>; Bioc-devel mailto:bioc-devel@r-project.org>> Subject: [Bioc-devel] No build report Dear all, I have pushed my updated package PERFect to Bioconductor last weekend but I haven't seen any build report yet. Is there something I can do in this s

Re: [Bioc-devel] No build report

t.edu>> Sent: Monday, April 27, 2020 10:15 AM To: Nitesh Turaga mailto:nturaga.b...@gmail.com>>; Bioc-devel mailto:bioc-devel@r-project.org>> Subject: [Bioc-devel] No build report Dear all, I have pushed my updated package PERFect to Bioconductor last weekend but I haven't seen any

Re: [Bioc-devel] No build report

Subject: [Bioc-devel] No build report Dear all, I have pushed my updated package PERFect to Bioconductor last weekend but I haven't seen any build report yet. Is there something I can do in this situation? Thanks, Quy -Original Message- From: Bioc-devel On Behalf Of Nitesh Tur

[Bioc-devel] No build report

Dear all, I have pushed my updated package PERFect to Bioconductor last weekend but I haven't seen any build report yet. Is there something I can do in this situation? Thanks, Quy -Original Message- From: Bioc-devel On Behalf Of Nitesh Turaga Sent: Monday, April 27, 2020 9:00 AM To:

[Bioc-devel] Devel Build Report

Hello all, We are experiencing some issues with our mac builder that has caused the build report not to be generated over the weekend. We will temporarily be excluding the mac builder (celaya2) in the devel build report until the issue is resolved. This should also allow a build report to be

[Bioc-devel] No build report today

The experiment data build report from yesterday and the software build report for today will not be posted. There was an ERROR generating the builds stemming from the SSL certificate issues we were having. The issues have been remedied and we expect the build report to post as normal

Re: [Bioc-devel] No build report today (April 24, 2019)

On 4/24/19 10:48, Pages, Herve wrote: > Hi developers, > > Due to some technical problems with the build system, there will be no > new build report today for the BioC 3.10 software builds. I meant for the BioC 3.9 builds sorry. (There won't be a report for the BioC 3.10 builds either but these

[Bioc-devel] No build report today (April 24, 2019)

Hi developers, Due to some technical problems with the build system, there will be no new build report today for the BioC 3.10 software builds. Sorry for the inconvenience. H. -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research

Re: [Bioc-devel] New build report

t; >>> Roswell Park Cancer Institute >>> >>> Department of Biostatistics & Bioinformatics >>> >>> Elm & Carlton Streets >>> >>> Buffalo, New York 14263 >>> -- >>> *From:* Alina

Re: [Bioc-devel] New build report

cs & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> ------ >> *From:* Alina Selega >> *Sent:* Friday, April 12, 2019 12:22:40 PM >> *To:* Shepherd, Lori >> *Cc:* bioc-devel >> *Subj

Re: [Bioc-devel] New build report

--- > *From:* Alina Selega > *Sent:* Friday, April 12, 2019 12:22:40 PM > *To:* Shepherd, Lori > *Cc:* bioc-devel > *Subject:* Re: [Bioc-devel] New build report > > Thank you for the instructions! > > Can I just clarify -- I was pushing changes to my G

Re: [Bioc-devel] New build report

Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Alina Selega Sent: Friday, April 12, 2019 12:22:40 PM To: Shepherd, Lori Cc: bioc-devel Subject: Re: [Bioc-devel] New build report Thank you for the inst

Re: [Bioc-devel] New build report

gt; > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > ---------- > *From:* Bioc-devel on behalf of Alina

Re: [Bioc-devel] New build report

y, April 12, 2019 12:04:03 PM To: bioc-devel Subject: Re: [Bioc-devel] New build report Hi, Sorry, I think I must have done something wrong as the build report is not showing the updates to my package from 2 days ago. Could you please help me with this? I thought I updated the version of BUMHMM c

Re: [Bioc-devel] New build report

Hi, Sorry, I think I must have done something wrong as the build report is not showing the updates to my package from 2 days ago. Could you please help me with this? I thought I updated the version of BUMHMM correctly (from 1.6.1 to 1.6.2 and 1.6.3) but it is not been picked up? Thanks, Alina

[Bioc-devel] no build report for July 10

FYI there was a power outage at RPCI today so there is no build report for July 10. Power was restored before the builds started today and it looks like we're on track for a successful build tomorrow. Valerie This email message may contain legally privileged and/or confidential information.

[Bioc-devel] devel build report

Hi, Just a heads up we got some wires crossed with yesterday's (June 8) devel build report. It should refresh normally today. Sorry about that. Valerie This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the