Re: [caret-users] Monkey Atlas and stereotaxic

2007-03-16 Thread donna
Hi Remya, Click Toolbar: D/C and select Surface Miscellaneous from the pull-down menu at the top. Select the checkbox labeled show cartesian axes. I confess I don't have Caret installed at home, where I'm answering, so I can't be sure of the exact label. Donna Hi Donna, Thank you for the

Re: [caret-users] Monkey Atlas and stereotaxic

2007-03-16 Thread Remya Nair
Ok , so its all done now and I see perfect overlap between the fiducial surface and volume after converting to the new stereotaxic space. Thanks Donna and John for your prompt replies!! Remya On Mar 16, 2007, at 9:43 AM, John Harwell wrote: Hi Remya, Load both your volume and one

Antw: Re: [caret-users] Monkey Atlas and stereotaxic

2007-03-15 Thread Freimut Juengling
Guten Tag Die von Ihnen angeschriebene Person ist unter dieser eMail-Adresse nicht mehr erreichbar. Wir danken für Ihre Kenntnisnahme. Inselspital Bern*

[caret-users] Monkey Atlas and stereotaxic

2007-03-14 Thread Remya Nair
Hi Caret-Gods...! I have a question regarding Caret and monkey atlas. I apologize for the basic nature of these questions, but I am a newbie to Caret and that is all i have to say in my defense!!! We have T1 weighted 0.5 isotropic resolution anatomical images of monkey brain. The final aim

Re: [caret-users] Monkey Atlas and stereotaxic

2007-03-14 Thread Donna Dierker
Hi Remya, Glad to hear you got your hands on a T1 scan. There's no documentation I know of that covers what you want to do, but it's not that hard (if I understand it correctly). I think you'll just need two versions of your volumes (one AC-centered, one inter-aural) and two versions of

Re: [caret-users] Monkey atlas and stereotaxic coordinates

2005-06-21 Thread Donna Hanlon
Hi Jochen, Yes -- sometimes the right sign is counter-intuitive. I'll add the generation of an interaural fiducial to my growing queue of atlas updates. Donna On 06/21/2005 02:25 PM, Jochen Ditterich wrote: Thanks, Donna. I had to get the signs right, but it seems to be working now. The

[caret-users] Monkey atlas and stereotaxic coordinates

2005-06-20 Thread Jochen Ditterich
Hi! I have a question regarding Caret and the monkey atlas. There are 4 different files under Volume Files - Anatomy. Two of them are apparently AC aligned, the two others are aligned with respect to the inter-aural axis. I would like to use the latter ones since this is the stereotaxic