[ccp4bb] Postdoctoral position at the Institute of Structural and Molecular Biology, London, UK

2018-02-09 Thread Philip JJ Robinson
I would like make you aware of an opening for a postdoctoral researcher in the Robinson Lab at the Institute of Structural and Molecular Biology (ISMB) within Birkbeck College, London UK. We are seeking an ambitious and driven research scientist to investigate the structure and function of

[ccp4bb] Postdoctoral position in Melbourne, Walter and Eliza Hall Institute, Australia

2018-02-09 Thread Isabelle Lucet
Postdoctoral position, Walter and Eliza Hall Institute of Medical Research. If you are interested in understanding the intricacy of Kinases/Pseudokinases regulation using CryoEM, X-ray crystallography, Imaging and chemical biology approaches, we have an exciting opportunity for a postdoctoral

Re: [ccp4bb] Arg distorsion during refinement

2018-02-09 Thread Dale Tronrud
Coincidentally, I just noticed this problem while perusing a validation report last night and am tooling up to see if I can get this problem fixed. The origin of the flaw is the asymmetry of the NH1 and NH2 atoms in Arginine. If one considers only bonding it would appear that these two

Re: [ccp4bb] Confidential Validation report

2018-02-09 Thread Bernhard Rupp
I strongly recommend doing a full validation and error check with the validation server https://validate-rcsb-1.wwpdb.org/ *BEFORE* you submit the actual deposition for annotation. Due to various shortcomings of the deposition software (e.g. the old validation report remaining in the

Re: [ccp4bb] Confidential Validation report

2018-02-09 Thread abhimanyu singh
Hi Jinyu, You will get the full validation reports once the entries are annotated by the PDB and you will be notified. The reports can then be accessed after logging into the respective deposition sessions. Greetings, Abhi On Fri, 9 Feb 2018 at 21:53 jlliu20022002 liu

[ccp4bb] Confidential Validation report

2018-02-09 Thread jlliu20022002 liu
Hi All, I have not deposited structures for a while and hope to get some information from here. I recently deposited 2 structures. I got the preliminary validation report and is still in communication with pdb staff regarding details of the deposition. My question is when I would be able to get

[ccp4bb] Arg distorsion during refinement

2018-02-09 Thread Oganesyan, Vaheh
Dear crystallographers, Lately when refining a structure (at 2.8A) with Refmac5 I've found that nearly all Arg residues get distorted at one angle: NE-CZ-NH1(2). Starting model has 120*, final model 123*(117*), which validation server considers a major issue. May any of you recognize why is

[ccp4bb] Postbaccalaureate position in membrane protein structure and function at the NIH

2018-02-09 Thread Anirban Banerjee
Dear all, > > I am looking for a postbac for a membrane protein > structure-function project in my lab at the NIH. We are currently focusing > on integral membrane enzymes (Science. 2018, doi: > 10.1126/science.aao6326) and transporters of transition metal ions (J > Biol Chem. 2018, doi:

Re: [ccp4bb] Might be of interest to this group

2018-02-09 Thread Keller, Jacob
I hope everyone realizes that I am very happy with off-topics, and love the praying mantis thing. It didn’t come off as cynical, did it? I just thought it funny to post to the crystallography list, and somewhat humorous to picture praying mantises running COOT etc. We should really find an

Re: [ccp4bb] Might be of interest to this group

2018-02-09 Thread Keller, Jacob
Or for the Praying Mantis Crystallographers’ association? JPK + Jacob Pearson Keller Research Scientist / Looger Lab HHMI Janelia Research Campus 19700 Helix Dr, Ashburn, VA 20147 Desk: (571)209-4000 x3159 Cell: (301)592-7004

Re: [ccp4bb] Postdoc position, structural biology, University of Cambridge, UK

2018-02-09 Thread Prof.V Koronakis
> > Dear structural biologists, > > We have an opportunity for a postdoctoral researcher in my lab in the > School of Biological Sciences, Department of Pathology, University of > Cambridge, UK. The successful applicant will continue our work on > bacterial multidrug resistance pumps, (e.g.

Re: [ccp4bb] Might be of interest to this group

2018-02-09 Thread Andreas Forster
Wouldn’t that be something for the PyMOL mailing list? All best - Andreas On Fri, 9 Feb 2018 at 20:38, David Schuller wrote: > http://www.cell.com/current-biology/fulltext/S0960-9822(18)30014-9 > A Novel Form of Stereo Vision in the Praying Mantis > Vivek Nityananda

[ccp4bb] ACA 2018 - Small Angle Scattering Workshop

2018-02-09 Thread Kushol Gupta
"Applications of Small Angle Scattering to Structural Biology: An Introduction." On behalf of the organizing committee, we are pleased to announce a workshop on "Applications of Small Angle Scattering to Structural Biology: An Introduction." This workshop will

[ccp4bb] Might be of interest to this group

2018-02-09 Thread David Schuller
http://www.cell.com/current-biology/fulltext/S0960-9822(18)30014-9 A Novel Form of Stereo Vision in the Praying Mantis Vivek Nityananda,Ghaith Tarawneh, Sid Henriksen,Diana Umeton,Adam Simmons, Jenny C.A. Read DOI:

[ccp4bb] ccp4 7.0 update 51

2018-02-09 Thread Charles Ballard
Dear All just released is ccp4 7.0.051 containing * phaser 2.8.2 * dials 1.8.4 * ample 1.4.1 * simbad 0.10.1 (linux and osx) * arcimboldo Thanks to the authors of the software, and enjoy CCP4 Core team

[ccp4bb] Marsden Funded PhD Project Available (New Zealand)

2018-02-09 Thread Jodie Johnston
Hi, I am looking for a suitable student for a PhD project we have on offer and thought this might be the perfect place to find a suitably experienced candidate. The project (Understanding protein communication networks) will involve a range of techniques (structural biology/protein