Dear all,
I've been trying to install the SuperSym module for pymol (svn trunk version of
pymol as of today, 1.3.x). Upon restart the console says Ooops! SuperSym
requires cctbx and numeric python to function. Please install these.
The system is i7 with Debian Testing 64bit with python2.5
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Tim Gruene
Sent: Wednesday, June 23, 2010 8:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pymol python and cctbx
Dear all,
I've been trying to install the SuperSym module for pymol (svn
us know how it works...
Carsten
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Tim Gruene
Sent: Wednesday, June 23, 2010 8:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pymol python and cctbx
Dear all,
I've
Of
Tim Gruene
Sent: Wednesday, June 23, 2010 8:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pymol python and cctbx
Dear all,
I've been trying to install the SuperSym module for pymol (svn trunk
version of pymol as of today, 1.3.x). Upon restart the console says
Ooops
...
Carsten
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Tim Gruene
Sent: Wednesday, June 23, 2010 8:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pymol python and cctbx
Dear all,
I've been trying
/install)
Good luck, let us know how it works...
Carsten
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Tim Gruene
Sent: Wednesday, June 23, 2010 8:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pymol python
On Wed, Jun 23, 2010 at 8:21 AM, Graeme Winter graeme.win...@googlemail.com
wrote:
There will be a cctbx.python dispatcher now which should set
everything up - however if you source setpaths_debug I think this
should make for a happy python as it includes everything from the
dispatcher.
On Wed, 23 Jun 2010 09:07:36 -0400 Schubert, Carsten [PRDUS]
cschu...@its.jnj.com wrote:
Tim,
I'm shooting from the hip here, but I think the problem is that cctbx
comes with its own python, which you would need to run both pymol and
numpy under. According to Ralf it is at least not trivial
Dear all who answered,
the combination of
- compiling cctbx from source
- modifying the pymol startup script to source the cctbx setpaths.sh AND use
cctbx.python (instead of /usr/bin/python) eventually works.
Thanks to all the responses to make this work.
Tim
On Wed, Jun 23, 2010 at
