Hi all,
I just want to ask another question related to this topic:
Based on the example given by Jerry McCully and if the data has
alternate strong and weak reflections, how can we split it into two
different files; one containing the weak reflections and the other
containing the strong
On Sep 4, 2009, at 11:04, Ben Ammar Youssef wrote:
Hi all,
I just want to ask another question related to this topic:
Based on the example given by Jerry McCully and if the data has
alternate strong and weak reflections, how can we split it into two
different files; one containing the weak
Dear Phil,
thank you very much for your thorough clarification.
Best regards,
Arefeh
Buccaneer is giving good results on a lot of cases now, and can work at
resolutions down to ~3.7A when the phases are very good. However, when
the starting phases are poor, it struggles.
I've recently been analysing some of the hard cases from my test data -
in particular one case at 3.0 and
One paper in Acta. Cryst. (2006) D62, 1369-1374 described the same
problem of pseudo-symmetry. To lower the Rfactor they used (h+k+l=2n+1)
odd reflections for rigid body refinement and (h+k+l=2n) even
reflections for restrained refinement. By this way they could decrease
R/Rfree from
Dear subscribers to the CCP4BB,
On my previous computer, I had in my bookmarks (Firefox bookmarks) the
URL for an automatic 3D structure superposition server based some place
in Canada. Unfortunately that computer crashed and I lost all my bookmarks.
What was nice was that one could simply
google for Tcoffee or EBI SSM, same functionality
Jürgen
On Sep 4, 2009, at 9:40 AM, Vellieux Frederic wrote:
Dear subscribers to the CCP4BB,
On my previous computer, I had in my bookmarks (Firefox bookmarks) the
URL for an automatic 3D structure superposition server based some
place
in
---BeginMessage---
Thanks to all who replied. Using a carefully worded search in google I
was able to locate (again) that server's URL
Just in case some of you are interested, here's the URL
http://wishart.biology.ualberta.ca/SuperPose/
Thanks again,
Fred.
Jürgen Bosch wrote:
google for
Dear CCP4bb,
I like to take this opportunity to draw your attention to the following role
(below).
Please follow the link to the AstraZeneca web site (job search DECS156) for
more details and application forms.
(please don't apply via this email!)
David Hargreaves
Hi Frédéric,
I think it is Superpose:
http://wishart.biology.ualberta.ca/SuperPose/
Good luck!
*
Toufic El Arnaout
Membrane Structural Functional Biology Group
L2-007, Lonsdale Building
University of Limerick, Ireland
From: for-crystallizai...@hotmail.com
To: yous...@ri.ncvc.go.jp
Subject: RE: [ccp4bb] Rfactor got stuck with a data having alternate strong and
weak reflections.
Date: Fri, 4 Sep 2009 07:36:34 -0700
Dear ALL;
I am sorry for being silent because I went out of town for a
Postdoctoral researcher in biological small-angle x-ray scattering at
the Stanford Synchrotron Radiation Lightsource (SSRL)
The Structural Molecular Biology group at SSRL, a Directorate of the
SLAC National Accelerator Laboratory has an immediate opening for a
postdoctoral researcher to join
Dear all,
sorry for the off-topic question. I want to buy a simple peristaltic pump to
apply larger sample volumes (300-500 mL) to simple affinity columns (desired
flow-rates: 2-8 mL/min). I was wondering whether the (good?)-old Pharmacia/GE
P1 pump still represents the best system engineers
This is interesting. Would it be possible to have refmac
provide some info WHICH U (i.e. atom) got negative EV ?
I did not find anything and I use monitor many per default.
Thx, BR
-Original Message-
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of Aaron
Oakley
Sent:
Stirred cell from Milipore is very useful for concentrating big volumes of
protein solution. There are cells from 3 to 400 mL. Ultrafiltration is
performed through the membrane with high pressure by connecting to inert gas
(nitrogen). It is very fast and comfortable technique. Here are more
Dear All,
the overwhelming consensus is ubuntu, largely for
wide variety of drivers incl. wireless and nvidia (which I can confirm was a
*...@%! nightmare under RH)
Partition Magic got high recommendations for dual boot.
Thx to all for the quick response.
BR
On Fri, 4 Sep 2009 14:57:21 -0700
Bernhard Rupp b...@ruppweb.org wrote:
Dear All,
the overwhelming consensus is ubuntu, largely for
wide variety of drivers incl. wireless and nvidia (which I can
confirm was a
*...@%! nightmare under RH)
Just to clarify, most drivers are available for
Hi,
We have a server for structural superposition.
http://cluster.physics.iisc.ernet.in/3dss/
thanks,
Sekar
Hi Frédéric,
I think it is Superpose:
http://wishart.biology.ualberta.ca/SuperPose/
Good luck!
*
Toufic El Arnaout
Membrane Structural
recent versions of ubuntu come with gparted on the install disk, so
you can repartion with a gui whose iCandy quotient is almost mac-
like. It makes it very simple to do, even for an idiot like me.
I am a big fan of xfce4 (install Xubuntu). It makes very low demands
on the hardware and
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