Access to collab-maint

Dear all, Is there anyone in the team who can grant me access to collab-maint ? I have sent a enquiry email via the Alioth page a while back and never got any reply. I have got some non-science related packages that I'd like to host on collab-maint instead of d-science / d-med. Thank you very

Re: Access to collab-maint

Hi Ghislain, On Wed, Apr 15, 2015 at 02:16:07PM +0100, Ghislain Vaillant wrote: Dear all, Is there anyone in the team who can grant me access to collab-maint ? I have sent a enquiry email via the Alioth page a while back and never got any reply. I have got some non-science related packages

Re: Access to collab-maint

Hi Andreas, On Wed, 15 Apr, 2015 at 3:14 PM, Andreas Tille andr...@an3as.eu wrote: Hi Ghislain, On Wed, Apr 15, 2015 at 02:16:07PM +0100, Ghislain Vaillant wrote: Dear all, Is there anyone in the team who can grant me access to collab-maint ? I have sent a enquiry email via the Alioth

Re: Access to collab-maint

Hi Ghislain, On Wed, Apr 15, 2015 at 06:06:49PM +0100, Ghislain Vaillant wrote: I vaguely remember that creating a repository on collab-maint need to be done by a DD and requires manual intervention. The description in [1] does not explicitly mentioned this is restricted to DD usage.

Looking for upload sponsor for r-cran-ggplot2

Hello Debian Med team, I updated the r-cran-ggplot2 package to a new upstream version. The automatic tests are running successfully and lintian is not reporting any errors. If you do not see anything else to do, I ask for tagging and uploading the package. Thanks and kind regards Benjamin --

Help needed in C++ / seqan issue

Hi, I've got some request to package mugsy which I started in Git[1]. The source contained several code copies. I think I sorted out the code copy of mummer by adding the patches contained in mugsy to the Debian packaged mummer (see my last upload). I also tried to get rid of the outdated

Re: Help needed in C++ / seqan issue

Hello Andreas, I did a debcheckout --user me git://git.debian.org/debian-med/mugsy.git \ --git-track '*' and then tried git-buildpackage -uc -us which gives me a gbp:error: upstream/1r2.3+dfsg is not a valid treeish I guess you have to do a git push --tags. I also have two

Re: Help needed in C++ / seqan issue

Hi Gert, On Wed, Apr 15, 2015 at 12:21:07PM +0200, Gert Wollny wrote: I admit I somehow regret that I had the following GSoC idea to late: Provide test suites for all Debian Med packages I think this makes a great GSoC project - we should remember this for next year. +1 :-)

Re: Help needed in C++ / seqan issue

Hi Gert, On Wed, Apr 15, 2015 at 10:53:27AM +0200, Gert Wollny wrote: gbp:error: upstream/1r2.3+dfsg is not a valid treeish I guess you have to do a git push --tags. Done. Sorry for the nuisance. I also have two dead links in the source tree mugsyWGA -

Re: Help needed in C++ / seqan issue

Hello Andreas, I admit I somehow regret that I had the following GSoC idea to late: Provide test suites for all Debian Med packages I think this makes a great GSoC project - we should remember this for next year. +1 One option to provide some tests in this case could be based on

Re: Update on Trinityrnaseq packaging

Hi Michael, On Tue, Feb 24, 2015 at 03:03:16PM +, Michael Crusoe wrote: I admit that I became optimistic after the latest discussion, that we have good chances to see libcolt-java in main in a sensible time frame (3-6 monthes ??). I'm definitely not sure about libjai-core-java. Do