Andreas Tille pushed to branch master at Debian Med / grabix
Commits:
959d167e by Andreas Tille at 2019-09-10T14:51:56Z
Use 2to3 to port to Python3
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31bb7457 by Andreas Tille at 2019-09-10T14:52:18Z
Build-Depends: s/python/python3/
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16e27577 by Andreas Tille at 2019-09-10T14
Andreas Tille pushed to branch master at Debian Med / lefse
Commits:
83bd6892 by Andreas Tille at 2019-09-11T07:29:17Z
Install lefse.py
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1 changed file:
- debian/rules
Changes:
=
debian/rules
=
@@ -8,7 +8,8
Olivier Sallou pushed new tag upstream/2.10.0 at Debian Med / ngs-sdk
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debian-med-commi
Olivier Sallou pushed new tag debian/2.10.0-1 at Debian Med / ngs-sdk
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Olivier Sallou pushed to branch pristine-tar at Debian Med / ngs-sdk
Commits:
d1f436e6 by Olivier Sallou at 2019-09-11T07:27:29Z
pristine-tar data for ngs-sdk_2.10.0.orig.tar.gz
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2 changed files:
- + ngs-sdk_2.10.0.orig.tar.gz.delta
- + ngs-sdk_2.10.0.orig.tar.gz.id
Changes:
===
Andreas Tille pushed to branch master at Debian Med / grabix
Commits:
cb3ec61c by Andreas Tille at 2019-09-11T07:12:42Z
Upload to unstable
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1 changed file:
- debian/changelog
Changes:
=
debian/changelog
=
@@
Andreas Tille pushed new tag debian/0.1.7-2 at Debian Med / grabix
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Andreas Tille pushed to branch upstream at Debian Med / metabit
Commits:
77692713 by Andreas Tille at 2019-09-11T08:43:49Z
New upstream version 0.0+git20170725.24cb3ee+dfsg
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2 changed files:
- + .gitignore
- metaBIT.py
Changes:
=
.gitignore
===
Andreas Tille pushed to branch master at Debian Med / metabit
Commits:
ab3427bf by Andreas Tille at 2019-09-11T08:39:21Z
Use git mode in watch file
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237d1f95 by Andreas Tille at 2019-09-11T08:40:52Z
Drop get-orig-source, use +dfsg suffix
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fa3649ec by Andreas Tille at 2019-09
Andreas Tille pushed new tag upstream/0.0+git20170725.24cb3ee+dfsg at Debian
Med / metabit
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Andreas Tille pushed to branch pristine-tar at Debian Med / metabit
Commits:
fad9be4f by Andreas Tille at 2019-09-11T08:43:59Z
pristine-tar data for metabit_0.0+git20170725.24cb3ee+dfsg.orig.tar.xz
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2 changed files:
- + metabit_0.0+git20170725.24cb3ee+dfsg.orig.tar.xz.delta
- + met
Andreas Tille pushed new tag debian/0.0+git20170725.24cb3ee+dfsg-1 at Debian
Med / metabit
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Andreas Tille pushed new tag debian/2.10.0-2 at Debian Med / ngs-sdk
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debian-med-commit
Andreas Tille pushed to branch master at Debian Med / ngs-sdk
Commits:
451a0670 by Andreas Tille at 2019-09-11T09:08:26Z
Drop Python2 support
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6bbd5c76 by Andreas Tille at 2019-09-11T09:10:08Z
debhelper-compat 12
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5cbd0aa9 by Andreas Tille at 2019-09-11T09:10:23Z
Standards-V
Andreas Tille pushed new tag upstream/1.2.13.4 at Debian Med / paleomix
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debian-med-
Andreas Tille pushed to branch master at Debian Med / paleomix
Commits:
95b58c29 by Andreas Tille at 2019-09-11T09:21:12Z
New upstream version 1.2.13.4
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30832404 by Andreas Tille at 2019-09-11T09:21:12Z
New upstream version
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7358da03 by Andreas Tille at 2019-09-11T09:21:27Z
U
Andreas Tille pushed to branch upstream at Debian Med / paleomix
Commits:
95b58c29 by Andreas Tille at 2019-09-11T09:21:12Z
New upstream version 1.2.13.4
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4 changed files:
- CHANGES.md
- docs/phylo_pipeline/usage.rst
- paleomix/nodes/picard.py
- paleomix/resources/examples/nature_pr
Andreas Tille pushed to branch pristine-tar at Debian Med / paleomix
Commits:
419a6506 by Andreas Tille at 2019-09-11T09:21:27Z
pristine-tar data for paleomix_1.2.13.4.orig.tar.gz
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2 changed files:
- + paleomix_1.2.13.4.orig.tar.gz.delta
- + paleomix_1.2.13.4.orig.tar.gz.id
Chang
Emmanuel Bourg pushed to branch master at Debian Med / pixelmed
Commits:
595b4ff8 by Emmanuel Bourg at 2019-09-11T10:48:58Z
Removed the BUILDDATE file from pixelmed.jar to make the build reproducible
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c2a16ee3 by Emmanuel Bourg at 2019-09-11T10:49:22Z
Fixed a typo in a patch descripti
Andreas Tille pushed new tag debian/0.3.2+dfsg-4 at Debian Med / pyqi
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debian-med-comm
Olivier Sallou pushed new tag upstream/2.9.0 at Debian Med / ncbi-blastplus
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debi
Olivier Sallou pushed to branch pristine-tar at Debian Med / ncbi-blastplus
Commits:
6fc6b3ab by Olivier Sallou at 2019-09-11T07:44:28Z
pristine-tar data for ncbi-blast+_2.9.0.orig.tar.gz
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2 changed files:
- + ncbi-blast+_2.9.0.orig.tar.gz.delta
- + ncbi-blast+_2.9.0.orig.tar.gz.id
Andreas Tille pushed to branch master at Debian Med / sleepyhead
Commits:
c1fffb2b by Andreas Tille at 2019-09-11T12:00:30Z
Drop libquazip5-headers from Build-Depends
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7cbf6b5a by Andreas Tille at 2019-09-11T12:00:53Z
debhelper-compat 12
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9a6692df by Andreas Tille at 2019-09
Olivier Sallou pushed new tag debian/2.9.0-1 at Debian Med / ncbi-blastplus
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debi
Olivier Sallou pushed to branch upstream at Debian Med / ncbi-blastplus
Commits:
777af403 by Olivier Sallou at 2019-09-11T07:42:44Z
New upstream version 2.9.0
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23 changed files:
- c++/compilers/unix/GCC.sh
- c++/compilers/vs2015/datatool.bat
- c++/compilers/vs2015/install.sh
- c++/c
Olivier Sallou pushed to branch master at Debian Med / ncbi-blastplus
Commits:
777af403 by Olivier Sallou at 2019-09-11T07:42:44Z
New upstream version 2.9.0
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980df12c by Olivier Sallou at 2019-09-11T07:44:28Z
Update upstream source from tag 'upstream/2.9.0'
Update to upstream version
Andreas Tille pushed new tag debian/1.0.0-beta-2+dfsg-7 at Debian Med /
sleepyhead
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Andreas Tille pushed to branch master at Debian Med / cycle
Commits:
f8f5280f by Andreas Tille at 2019-09-11T13:33:04Z
Fix Python3 conversion
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e74b3641 by Andreas Tille at 2019-09-11T13:41:17Z
Fix exception
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52df64df by Andreas Tille at 2019-09-11T13:47:31Z
autopep8
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Shayan Doust pushed to branch master at Debian Med / lefse
Commits:
3295faf2 by Shayan Doust at 2019-09-11T14:19:31Z
Include an autopkgtest
Simple comparative tests to see if installed files return an expected output
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2 changed files:
- + debian/tests/control
- + debian/tests/run-u
Shayan Doust pushed to branch master at Debian Med / lefse
Commits:
dcb12077 by Shayan Doust at 2019-09-11T14:24:21Z
Append to changelog
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1 changed file:
- debian/changelog
Changes:
=
debian/changelog
=
@@ -
Andreas Tille pushed to branch master at Debian Med / lefse
Commits:
c5b0fcc9 by Andreas Tille at 2019-09-11T15:45:13Z
DEP3
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228c5c0e by Andreas Tille at 2019-09-11T15:46:22Z
Spelling
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4 changed files:
- debian/mans/plot_features.1
- debian/mans/plot_res.1
- debian/mans/r
Shayan Doust pushed to branch master at Debian Med / lefse
Commits:
6883422d by Shayan Doust at 2019-09-11T16:22:58Z
Some unit test refinements
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1 changed file:
- debian/tests/run-unit-test
Changes:
=
debian/tests/run-unit-test
===
Andreas Tille pushed new tag debian/1.0.8-3 at Debian Med / lefse
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Andreas Tille pushed to branch master at Debian Med / lefse
Commits:
9e3a1c26 by Andreas Tille at 2019-09-11T19:08:26Z
Depends: python3-matplotlib
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e83d8645 by Andreas Tille at 2019-09-11T19:15:44Z
Fix permissions
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e6add0b4 by Andreas Tille at 2019-09-11T19:16:14Z
Upload to
Andreas Tille pushed to branch master at Debian Med / phyx
Commits:
8ab2c63e by Andreas Tille at 2019-09-11T19:21:16Z
Add changelog entry
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54631f6a by Andreas Tille at 2019-09-11T19:21:51Z
debhelper-compat 12
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aae7183c by Andreas Tille at 2019-09-11T19:21:56Z
Standards-Versi
Andreas Tille pushed new tag debian/0.999+ds-2 at Debian Med / phyx
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Liubov Chuprikova pushed to branch master at Debian Med / qiime
Commits:
914f2e98 by Liubov Chuprikova at 2019-09-11T20:16:07Z
Changes in d/TODO
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1 changed file:
- debian/TODO
Changes:
=
debian/TODO
=
@@ -14
Andreas Tille pushed to branch master at Debian Med / phyx
Commits:
14cbc52c by Andreas Tille at 2019-09-11T20:33:09Z
Install Phyx_Gui
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3 changed files:
- debian/changelog
- debian/control
- debian/rules
Changes:
=
debian/changelog
===
Steffen Möller pushed to branch master at Debian Med / qiime
Commits:
cca9ab5a by Steffen Möller at 2019-09-11T20:46:27Z
Steffen starts work on DADA2 R BioC package
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1 changed file:
- debian/TODO
Changes:
=
debian/TODO
=
Liubov Chuprikova pushed to branch master at Debian Med / emperor
Commits:
a50da268 by Liubov Chuprikova at 2019-09-11T21:06:55Z
Update Files-Excluded
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1 changed file:
- debian/copyright
Changes:
=
debian/copyright
Steffen Möller pushed to branch master at Debian Med / qiime
Commits:
f08076a6 by Steffen Möller at 2019-09-11T21:40:27Z
Update TODO - data2 has dependency on rcppparallel
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1 changed file:
- debian/TODO
Changes:
=
debian/TODO
==
Steffen Möller pushed to branch master at Debian Med / bcbio
Commits:
1e5c05c4 by Steffen Möller at 2019-09-11T21:50:04Z
Update TODO - cthreadpool accepted, viennarna progressed
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1 changed file:
- debian/TODO
Changes:
=
debian/TODO
Shayan Doust pushed to branch master at Debian Med / simka
Commits:
b5d5ae64 by Shayan Doust at 2019-09-11T22:22:45Z
Fix linking error
Template functions must be entirely written in header but gatb-core has worked
around this by cmake-generated templates. "Hard-code" some gatb-core
variables.
Shayan Doust pushed to branch master at Debian Med / simka
Commits:
f1d6d0f6 by Shayan Doust at 2019-09-11T23:59:41Z
Add new build-depends (libboost-dev)
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7442346c by Shayan Doust at 2019-09-12T00:00:28Z
Standards-version 4.4.0
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1 changed file:
- debian/control
Changes:
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