Re: [discuss] Image processing with Python

2018-08-20 Thread François Michonneau via discuss
s > blog ? > > > Cheers, > > Carlos > > > From: Tim McNamara > Sent: 16 August 2018 01:39:57 > To: discuss > Subject: Re: [discuss] Image processing with Python > > Feel free to harvest the source of this file if anyone would like to pub

Re: [discuss] Image processing with Python

2018-08-20 Thread Ashwin Srinath
is on the eScience center blog > (https://blog.esciencecenter.nl/)? And maybe cross posting on the > carpentries blog ? > > > Cheers, > > Carlos > > > From: Tim McNamara > Sent: 16 August 2018 01:39:57 > To: discuss > Subject

Re: [discuss] Image processing with Python

2018-08-20 Thread Carlos Martinez Ortiz
blog ? Cheers, Carlos From: Tim McNamara Sent: 16 August 2018 01:39:57 To: discuss Subject: Re: [discuss] Image processing with Python Feel free to harvest the source of this file if anyone would like to publish something in a more visible location: https

Re: [discuss] Image processing with Python

2018-08-15 Thread Tim McNamara
Feel free to harvest the source of this file if anyone would like to publish something in a more visible location: https://git.nzoss.org.nz/tim-mcnamara/notebook/blob/master/image-processing-tutorials.md Tim McNamara https://tim.mcnamara.nz | @timClicks On 16

Re: [discuss] Image processing with Python

2018-08-15 Thread Pablo Hernandez via discuss
Hello all, such a good collection of resources! I would like to add the effort of the image analysis library Insight ToolKit (ITK) to quickly create 3D visualizations in the web and/or with jupyter notebooks. They are not in a lesson format, but it is promising! Here is a mybinder with all the

Re: [discuss] Image processing with Python

2018-08-15 Thread mbgoodman via discuss
Hello all, I am sorry I missed this thread in May.  As Amy Hodge noted, we have been developing image processing lessons at Stanford.  The first iteration was held in 2017 and was built by a team of Stanford grad students mentored by Greg Wilson.  We are in the midst of updating four lessons

Re: [discuss] Image processing with Python

2018-08-14 Thread Carlos Martinez Ortiz
02:59:09 To: discuss Subject: Re: [discuss] Image processing with Python This is not python, but the concepts will be the same and there may be some bits in here that aren't in the other resources that people shared. http://www.datacarpentry.org/r-raster-vector-geospatial/ On Fri, May 25, 2018

Re: [discuss] Image processing with Python

2018-05-25 Thread Kevin Vilbig via discuss
This is not python, but the concepts will be the same and there may be some bits in here that aren't in the other resources that people shared. http://www.datacarpentry.org/r-raster-vector-geospatial/ On Fri, May 25, 2018 at 2:12 PM, Jonah Duckles wrote: > More to

Re: [discuss] Image processing with Python

2018-05-25 Thread Juan Nunez-Iglesias via discuss
To add to the avalanche, we have a lot of materials at https://github.com/scikit-image/skimage-tutorials/tree/master/lectures The numbered ones are the most complete/polished. Juan. On 25 May 2018, 9:07 AM -0700, Luis Pedro Coelho , wrote: > I have a partially (cell-biology

Re: [discuss] Image processing with Python

2018-05-25 Thread Luis Pedro Coelho
I have a partially (cell-biology focused) Jupyter tutorial at: https://github.com/luispedro/python-image-tutorial HTH Luis -- Luis Pedro Coelho | EMBL | http://luispedro.org PI of Big Data Biology Lab at Fudan University (start mid-2018) http://big-data-biology.org On Fri, 25 May 2018, at

Re: [discuss] Image processing with Python

2018-05-25 Thread Amy E. Hodge
carpentries.org> Date: Friday, May 25, 2018 at 7:45 AM To: discuss <discuss@lists.carpentries.org> Subject: Re: [discuss] Image processing with Python Thank you all for your input, I'm sure I can put together a nice lesson with all your suggestions  Many thanks! __

Re: [discuss] Image processing with Python

2018-05-25 Thread Carlos Martinez Ortiz
Thank you all for your input, I'm sure I can put together a nice lesson with all your suggestions  Many thanks! From: Bennet Fauber <ben...@umich.edu> Sent: 25 May 2018 14:38:57 To: discuss Subject: Re: [discuss] Image processing with Python Carlos

Re: [discuss] Image processing with Python

2018-05-25 Thread Bennet Fauber
Carlos, You might find something in this lesson useful https://bic-berkeley.github.io/psych-214-fall-2016/arrays_and_images.html There are also three exercises in the parent lesson, https://bic-berkeley.github.io/psych-214-fall-2016/day_01.html As others have said, possibly not

Re: [discuss] Image processing with Python

2018-05-25 Thread Olav Vahtras via discuss
Check out the scipy lecture notes https://www.scipy-lectures.org/ A couple of sections on image processing Regards Olav > 25 maj 2018 kl. 13:36 skrev Ashwin Srinath : > > Carlos, > > Here's a Python tutorial focused on packaging, testing, and > performance using very

Re: [discuss] Image processing with Python

2018-05-25 Thread Ashwin Srinath
Carlos, Here's a Python tutorial focused on packaging, testing, and performance using very simple image analysis: https://github.com/clemsonciti/scientific-python I'm not sure if it's appropriate for complete novices, but I'm leaving it here in case you can salvage anything from it. Let me know

[discuss] Image processing with Python

2018-05-25 Thread Carlos Martinez Ortiz
Hello! Does anybody have material for an image processing lesson? I am preparing a workshop for a group of people who will mostly be working with image analysis and thought it might be good if I can tune the content a little bit to make it more interesting to them. Any would be most