Yes, this works on my local instance. Did you restart your Galaxy instance
after adding the welcome_url setting?
On Jul 29, 2013, at 11:02 PM, neil.burd...@csiro.au wrote:
Yes I tried that but I still only see the default welcome.html page. Have you
got this to work?
Thanks
Neil
From:
Hi everyone，
I am a newer in Galaxy. I installed my Galaxy with Torque2.5.0 . I used my
job_conf.xml for a test ,my Galaxy seems to work with TORQUE by the interface
of pbs_modoule ( _pbs.so) successfully.
In my test job_conf.xml , it seems that we should use toolscollection of
tool
Hello all,
Re:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-June/010153.html
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-October/011557.html
Something I raised during the GCC2013, and we talked about
via Twitter as well was a Galaxy environment variable for use
within Tool Wrappers
My question is related to this post
http://dev.list.galaxyproject.org/Number-of-outputs-number-of-inputs-td4656644.html
in the archive. As recommended, I referred to
http://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Number_of_Output_datasets_cannot_be_determined_until_tool_run
Yes, I tried it and everything appeared to load fine using the url
indicated above. The data volume was mounted correctly, and it appears the
custom installation is in place though I would have no idea what it is or
does.
Did you install all the custom stuff originally? If not, it may be useful
I would actually prefer we use $GALAXY_SLOTS.
--
James Taylor, Assistant Professor, Biology/CS, Emory University
On Tue, Jul 30, 2013 at 11:18 AM, Peter Cock p.j.a.c...@googlemail.com wrote:
Hello all,
Re:
http://lists.bx.psu.edu/pipermail/galaxy-dev/2012-June/010153.html
On Tue, Jul 30, 2013 at 4:29 PM, Shafer, Christina
csha...@morgridgeinstitute.org wrote:
My question is related to this post in the archive. As recommended, I
referred to
On Tue, Jul 30, 2013 at 4:39 PM, James Taylor ja...@jamestaylor.org wrote:
I would actually prefer we use $GALAXY_SLOTS.
I like that too, CPUs is a bit of a fuzzy term with multiple cores,
and SLOTS has familiarity from the SGE terminology as well.
Peter
On Jul 30, 2013, at 11:40 AM, Peter Cock wrote:
On Tue, Jul 30, 2013 at 4:39 PM, James Taylor ja...@jamestaylor.org wrote:
I would actually prefer we use $GALAXY_SLOTS.
I like that too, CPUs is a bit of a fuzzy term with multiple cores,
and SLOTS has familiarity from the SGE terminology
On Tue, Jul 30, 2013 at 4:44 PM, Nate Coraor n...@bx.psu.edu wrote:
On Jul 30, 2013, at 11:40 AM, Peter Cock wrote:
On Tue, Jul 30, 2013 at 4:39 PM, James Taylor ja...@jamestaylor.org wrote:
I would actually prefer we use $GALAXY_SLOTS.
I like that too, CPUs is a bit of a fuzzy term with
On Jul 30, 2013, at 11:47 AM, Peter Cock wrote:
On Tue, Jul 30, 2013 at 4:44 PM, Nate Coraor n...@bx.psu.edu wrote:
On Jul 30, 2013, at 11:40 AM, Peter Cock wrote:
On Tue, Jul 30, 2013 at 4:39 PM, James Taylor ja...@jamestaylor.org wrote:
I would actually prefer we use $GALAXY_SLOTS.
I
Hey,
1 I installed Galaxy locally.
2 I also have BWA installed and then used the
3 shed repository to get the bwa wrapper.
4 I have the reference genome
now I'm stuck with the calculate SA coordinate. Segmenation fault.
Google tells me that it could be a problem with
-space (I have 4GB left)
Yes- I know that it loads in the workaround that you created, but it
doesn't run. The non-workaround version running fine until the last
Saturday of June. I know that Greg, who installed it, hasn't touched it in
months. Could this be related to the update that was recently completed?
That was
HI - did you find anything with the share string? Thanks, Deniz
On Fri, Jul 26, 2013 at 3:32 PM, Dannon Baker dannon.ba...@gmail.comwrote:
Ahh, ok, I misunderstood and thought you were saying there was a different
error for the workaround. Are you able to send me the share string
(directly
Dear Galaxy devs,
I am attempting to create a style directory to match my school's look
and feel. I am mainly trying to get the development environment setup to do
this right now. My current problem is that when I attempt to compile the
standard blue_colors.ini which comes with galaxy I am
Hi list,
I ran into the following problem:
$ sh run_galaxy_listener.sh
Traceback (most recent call last):
File scripts/galaxy_messaging/server/amqp_consumer.py, line 33, in module
from galaxy.web.api.requests import RequestsAPIController
ImportError: No module named api.requests
Changed
I was using the quotas api to update a quota amount and got the error:
galaxy.web.framework ERROR 2013-07-30 15:40:59,149 Uncaught exception in
exposed API method:
Traceback (most recent call last):
File /Users/jj/gxt/gxt/lib/galaxy/web/framework/__init__.py, line 189, in
decorator
rval
Hi guys,
We've been using Galaxy for a year now, we created our own Galaxy fork where we
were making changes to adapt Galaxy to our requirements. As we need multiple
file dataset - we were using Johns' fork for that initially.
Now we are trying to use The most updated version of the
Dear All,
The galaxy community now has a mailing list dedicated to proteomics. If you're
using galaxy to do proteomics, or if you are thinking of doing so then this
list if for you.
In case you missed it, there is also a proteomics wiki page at
http://wiki.galaxyproject.org/Proteomics
To
19 matches
Mail list logo
