Yes, I tried it and everything appeared to load fine using the url
indicated above. The data volume was mounted correctly, and it appears the
custom installation is in place though I would have no idea what it is or
does.
Did you install all the custom stuff originally? If not, it may be useful
Yes- I know that it loads in the workaround that you created, but it
doesn't run. The non-workaround version running fine until the last
Saturday of June. I know that Greg, who installed it, hasn't touched it in
months. Could this be related to the update that was recently completed?
That was
HI - did you find anything with the share string? Thanks, Deniz
On Fri, Jul 26, 2013 at 3:32 PM, Dannon Baker dannon.ba...@gmail.comwrote:
Ahh, ok, I misunderstood and thought you were saying there was a different
error for the workaround. Are you able to send me the share string
(directly
Dannon- the problems that I saw were with the workaround (see last post).
The instance launches, but the program stops when it can't find something
(module/dependencies).
There were also some different steps in setting up the instance. I had to
create my own key pair, whereas in the past I never
Ahh, ok, I misunderstood and thought you were saying there was a different
error for the workaround. Are you able to send me the share string
(directly if you want, feel free to drop the list) so that I might take a
look? There should be no change at all in your instances from before the
new
On Thu, Jul 25, 2013 at 4:47 PM, Deniz Erezyilmaz deniz...@gmail.comwrote:
The workaround doesn't seem to work
Can you tell me what happens when you launch with the workaround mentioned
previously (
https://main.g2.bx.psu.edu/cloudlaunch?ami=ami-da58aab3bucket_default=gxy-workshop)?
This
Hi- I'm wondering if the share string problem will be fixed this week. The
workaround doesn't seem to work and I have needed to analyze my data for
almost a month. When I try to start the run:
ubuntu@ip-10-218-95-180:/mnt/galaxyData/custom/MY_MSG_RUN$ perl
msg/msgCluster.pl
I get:
started
Hi- there is a new problem: started 07/24/2013 21:16:27
./test_dependencies.sh
All required executables found in PATH
All required R packages are installed
Required module not found:
/mnt/galaxyData/custom/bin/python_libs/lib/python/pysam-0.6-py2.7-linux-x86_64.egg/csamtools.so:
undefined
Hi- while I was able to solve the share string problem, the share string
has stopped working again. In addition, I am unable to increase disk size
either through the CloudMan console or a dialog box that appears before the
cloudman console. Below are the cluster status logs. The Disk status
The warning message printed by the first ssh attempt indicates that you
have no cloudman_key_pair.pem in the directory you executed the ssh command
from. Find this file (or create a new one) and you'll be able to ssh.
Good luck, and please keep threads on the list instead of emailing
directly.
Thanks guys! I'm going to try it out now.
Would you mind letting me know when the issues are fixed next week?
(updating this thread would be fine)
Thanks again,
Greg
On Tue, Jul 16, 2013 at 12:42 PM, Dannon Baker dannon.ba...@gmail.com wrote:
Hey Greg,
We put together a quick workaround
Thanks for getting back to me, Enis.
I went ahead and started a new cluster instance. I'll try to leave it
running today in case there's anything we want to check.
Here's my whole process:
Start Screen Setup:
--
http://snag.gy/DMIeC.jpg
Entering my share
Hi Greg,
Sorry for replying really late.
So, I'm guessing this was an old cluster that was shared and is now being
derived on a new cluster? There was a large number of paths we explored
while getting ready for the upgrade and I was of the opinion we covered
that path but it seems things are not
Hi guys,
I just thought I'd check in again. None of the researches that want
to run out genotyping program can do so until I figure this out. Any
help or advice at all would be greatly appreciated.
Thanks,
Greg
On Mon, Jul 8, 2013 at 8:43 AM, greg margeem...@gmail.com wrote:
Hi guys,
Any
Hi guys,
Any thoughts on this? I'm kind of stuck.
(Even some pointers on where to look for more clues would be extremely helpful.)
Thanks,
Greg
On Fri, Jul 5, 2013 at 11:10 AM, greg margeem...@gmail.com wrote:
Hi guys,
I'm hitting an error using CloudMan using the Share-an-Instance
Hi guys,
I'm hitting an error using CloudMan using the Share-an-Instance
option. It says:
Error creating volume from shared cluster's snapshot
'['snap-cfa775ba']': 'filesystems'.
Also disk stats says 0 /0 and the Applications light is yellow while
the data light is green.
I'm using the share
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