Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-24 Thread Greg Von Kuster
Hello Rico, This used to work, and I have no idea when it was broken, but it should now be working again as of 10688:27a3c2f3fc20, which is currently running only on the test tool shed. The main tool shed will be updated with this fix when the next Galaxy release happens. Thanks for

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-23 Thread Richard Burhans
Greg, That's part of the issue. Please try the following: 1) Direct your browser to http://toolshed.g2.bx.psu.edu/view/miller- lab/genome_diversity 2) Choose 33:5064f618ec1c under Repository revision 3) View README under Repository README files - may contain important installation or

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-22 Thread Greg Von Kuster
Hi Rico, It looks like the files on disk simply did not have the hg update applied when the last changeset was committed. g2cmnty@montana:~/galaxy_toolshed/database/community_files/000/repo_200$ hg update 46 files updated, 0 files merged, 26 files removed, 0 files unresolved

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-21 Thread Richard Burhans
Greg, To be more clear, montana has revision 4188853b940b on disk, which is not the tip revision, 5064f618ec1c. g2cmnty@montana:~/galaxy_toolshed/database/community_files/000/repo_200$ hg summary parent: 30:4188853b940b Update to Miller Lab devshed revision eb4e61d024db branch: default

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-21 Thread Greg Von Kuster
Hi Rico, On Sep 21, 2013, at 5:56 PM, Richard Burhans r...@bx.psu.edu wrote: Greg, To be more clear, montana has revision 4188853b940b on disk, which is not the tip revision, 5064f618ec1c. Unless I am missing something, montana has revisions 5064f618ec1c on disk:

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-21 Thread Richard Burhans
Greg, On Sep 21, 2013, at 6:03 PM, Greg Von Kuster wrote: Hi Rico, On Sep 21, 2013, at 5:56 PM, Richard Burhans r...@bx.psu.edu wrote: Greg, To be more clear, montana has revision 4188853b940b on disk, which is not the tip revision, 5064f618ec1c. Unless I am missing something,

Re: [galaxy-dev] Tool Shed: get_readme_files bug

2013-09-20 Thread Greg Von Kuster
Hello Rico, I'm not seeing a problem here. The revision of the genome_diversity you're referring to is the repository tip on the main tool shed. The README file on disk has this content: g2cmnty@montana:~/galaxy_toolshed/database/community_files/000/repo_200$ cat README Source code for the