Hi Hemant,
thanks for your help. I have set the value to 100, but this did not fix the
problem.
I am now trying to get a NFS mounted with -noac.
Cheers,
Sascha
Original Message
processed by CONSOLIDATE
Subject:
RE: [galaxy-dev] Job output not returned from Cluster
Sent:
Montag,
On Tue, May 1, 2012 at 3:46 PM, Dannon Baker dannonba...@me.com wrote:
I'll take care of it. Thanks for reminding me about the TODO!
This seems to have reached galaxy-central now:
https://bitbucket.org/galaxy/galaxy-central/changeset/dc20a7b5b6ce
i.e. When Galaxy creates sub-jobs from tools
Hi,
I have submitted tophat to run on two datasets yesterday morning. The jobs
waited in the queue whole yesterday and the statues now show the output files
being deleted. Not knowing the architecture that these services are running on,
we also tried to submit couple of alignments for smaller
Dear developers,
I'm wondering if you might be able to help us with an issue with have at Leeds.
We have installed the galaxy platform on our HPC cluster at Leeds. One issue we
have is uploading files 2 GB through the internet browser. We have tried the
URL route also without success. Are
A suggested change will be coming down the pipe shortly, but it's good to
hear that it will be useful!
-Scott
- Original Message -
On Tue, May 1, 2012 at 3:46 PM, Dannon Baker dannonba...@me.com
wrote:
I'll take care of it. Thanks for reminding me about the TODO!
This seems to
I am trying to install a tool (tmap_wrapper) from the Galaxy toolshed
using the Admin interface to Galaxy. Unfortunately, each time I do this
I get an error page with the message:
No action for /admin_toolshed/prepare_for_install
My Galaxy installation is galaxy-dist, revision 7148:17d57db9a7c0.
Hello Peter,
To use the public Galaxy tool sheds, your local Galaxy instance must be running
the tip from Galaxy central, not Galaxy dist. You need to be running at least
7368:3e6ab1cf0c2e, as this is the revision running on the public tool sheds.
The public tool sheds always track the
Hi Peter,
In your Galaxy install directory there will be a .hg subdirectory, and in that
subdirectory there will be a file name hgrc. Yours probably looks something
like this if you are tracking galaxy-dist.
[paths]
default = https://,your userna...@bitbucket.org/galaxy/galaxy-dist
Just
