On Fri, Jan 30, 2015 at 9:24 AM, Shrum, Donald C dcsh...@admin.fsu.edu wrote:
Hi all,
I’ve configured one of our tools to submit jobs to our condor cluster. I
can see the job is routed to the condor runner:
== handler4.log ==
galaxy.jobs.handler DEBUG 2015-01-30 09:14:58,092 (508)
Hi Dannon, Nicola,
This sounds very promising - I'll rerun the TravisCI job and we can
expect it to work this time :)
https://bitbucket.org/galaxy/galaxy-central/commits/3618b7a91e23096ecf7ce5842c1e16c749251a4d
(half an hour ago!)
When will this reach the Tool Shed and Test Tool Shed? The
Hi Anne,
moving the whole Galaxy installation is a tough job and we do not really
have a good process for it. Your problem is most probably caused by the
inconsistency in the DB. The path to the shed_tool_conf.xml is stored there
and the changes you made to the location of the installation did
On Thu, Jan 29, 2015 at 4:43 PM, Joseph Brent Greer
joseph.gr...@northwestern.edu wrote:
Hi all,
We have Pulsar working in a synchronous fashion using RESTful services on
our local network. Now, we’re trying to use Pulsar on a remote (SGE) cluster
and we will not have the ability to mount a
Retitling thread,
On Thu, Nov 6, 2014 at 11:08 AM, Peter Cock p.j.a.c...@googlemail.com wrote:
Thanks Dave,
The good news is yes, the tests are running again on the
Test Tool Shed (although not the main Tool Shed yet), and
many of my tools now have successful test results from
last night.
Yep, the FutureWarning that that commit resolves would have caused the
upload job to end up as an error; I'm betting this is what was causing
Peter's issues too.
On Fri Jan 30 2015 at 12:18:10 PM Nicola Soranzo nsora...@tiscali.it
wrote:
Hi Peter,
I was also getting Exception: History in
On Fri Jan 30 2015 at 5:36:29 AM Peter Cock
https://toolshed.g2.bx.psu.edu/repository/get_functional_
test_rss?owner=peterjcstatus=all
Internal Server Error
...
Trello issue logged,
https://trello.com/c/ZOW0NPzb/2378-main-toolshed-rss-feed-
for-test-results-offline
Also still
On Fri, Jan 30, 2015 at 2:07 PM, Dannon Baker dannon.ba...@gmail.com wrote:
On Fri Jan 30 2015 at 5:36:29 AM Peter Cock
https://toolshed.g2.bx.psu.edu/repository/get_functional_test_rss?owner=peterjcstatus=all
Internal Server Error
...
Trello issue logged,
Good morning Gents,
I hope everyone is well.
I was wondering if it's possible to share data on Galaxy without all the users
downloading the data to their history.
Let me explain, teachers will be sharing data with their students.
And the students will need to work with that specific data.
Bjoern's answer is a good one. Another way we commonly do this is by
preparing a 'base' history published with the datasets the students need to
get started -- something like
https://usegalaxy.org/u/mimi31k/h/chip-seq-example-1-raw-data. Students
then click a single button to import that history
10 matches
Mail list logo
