: Peter Cock [mailto:p.j.a.c...@googlemail.com]
Sent: May-26-16 3:32 AM
To: Fernandez Edgar <edgar.fernan...@umontreal.ca>; Nate Coraor
<n...@bx.psu.edu>
Cc: galaxy-...@bx.psu.edu
Subject: Re: [galaxy-dev] not sure what I can do about this...
Sorry Edgar,
It looks like something els
galaxy-...@bx.psu.edu
Subject: Re: [galaxy-dev] not sure what I can do about this...
Hi Edgar,
Are your Galaxy server AND your cluster are all running Oracle Linux 6?
If yes, my guess about the cluster using an older version of Linux compared to
the Galaxy server is unrelated.
Peter
On Tue,
Hi Edgar,
Are your Galaxy server AND your cluster are all running
Oracle Linux 6?
If yes, my guess about the cluster using an older version
of Linux compared to the Galaxy server is unrelated.
Peter
On Tue, May 24, 2016 at 7:47 PM, Fernandez Edgar
wrote:
> Hello
-GAUDRY, bureau X-210
I Bur. : 1-514-343-6111 poste 16568
-Original Message-
From: Peter Cock [mailto:p.j.a.c...@googlemail.com]
Sent: May-24-16 2:29 PM
To: Fernandez Edgar <edgar.fernan...@umontreal.ca>
Cc: galaxy-...@bx.psu.edu
Subject: Re: [galaxy-dev] not sure what I can do
-16 8:48 AM
To: 'galaxy-...@bx.psu.edu' <galaxy-...@bx.psu.edu>
Subject: RE: [galaxy-dev] not sure what I can do about this...
Hey Guys,
I’ve fixed my first problem with the environment.
But I’m still getting the second one.
Also, did any of you guys try to deploy galaxy with Microsoft Azur
Hi Fernandez,
We saw something very like that with mixed versions of Linux,
specifically our Galaxy head node where pysam was installed
had CentOS 7, but the node where Galaxy was trying to run
the metadata detection was CentOS 6. Unfortunately I do
not have a record of the exact traceback - but
formation et de la Communication
>
> *Université de Montréal*
>
>
>
> PAVILLON ROGER-GAUDRY, bureau X-210
>
> ( Bur. : *1-514-343-6111 poste 16568*
>
>
>
>
>
> *From:* Fernandez Edgar
> *Sent:* May-18-16 2:00 PM
> *To:* galaxy-...@bx.psu.edu
>
:00 PM
To: galaxy-...@bx.psu.edu
Subject: RE: [galaxy-dev] not sure what I can do about this...
Hey Guys,
Hope everyone is doing well.
So I’m back at galaxy v16.01
I’m having a small problem.
My python system version is 2.6.6
So I installed python version 2.7.8 from Software Collection Library
Hey Guys,
Hope everyone is doing well.
So I’m back at galaxy v16.01
I’m having a small problem.
My python system version is 2.6.6
So I installed python version 2.7.8 from Software Collection Library release
1.2 packages for Oracle Linux 6
Hi Edgar,
please download the latest version of tbl2asn from here:
ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program/tbl2asn/
and replace it with your version, this will probably fix your error.
Cheers,
Bjoern
Am 29.09.2015 um 14:05 schrieb Fernandez Edgar:
> Hello Gents,
>
>
[mailto:bjoern.gruen...@gmail.com]
Envoyé : September-29-15 8:10 AM
À : Fernandez Edgar; galaxy-...@bx.psu.edu
Objet : Re: [galaxy-dev] not sure what I can do about this...
Hi Edgar,
please download the latest version of tbl2asn from here:
ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/converters/by_program
On Tue, Sep 29, 2015 at 1:12 PM, Fernandez Edgar
wrote:
> Hello Björn,
>
> Thank you for answering!
> When I installed Prokka from the Galaxy ToolShed, all the dependencies were
> installed too.
> tbl2asn is one of those dependencies...
> How would I replace it?
>
>
nvoyé : September-29-15 10:27 AM
À : Peter Cock; Fernandez Edgar; Nicola Soranzo (TGAC)
Cc : Björn Grüning; galaxy-...@bx.psu.edu
Objet : Re: [galaxy-dev] not sure what I can do about this...
I will make a new package for tbl2asn. Our lab is not too happy that tbl2asn
expires and causes lots of is
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