Hi All,
We are thinking of putting our galaxy instance in a new more powerful
environment. Galaxy is now on a single server containing a psql database
which is migrated from mysql a few years ago.
The new environment already houses a really nice backupped highly available
mysql server.
as galaxy
/27/2015 02:35 PM, Eric Kuyt wrote:
Hi All,
We are thinking of putting our galaxy instance in a new more powerful
environment. Galaxy is now on a single server containing a psql database
which is migrated from mysql a few years ago.
The new environment already houses a really nice
Hey guys, today I updated to the latest version of galaxy. No I noticed
that because of the new virtualenv/wheel startup procedure, the init
scripts as mentioned here
https://wiki.galaxyproject.org/Events/GCC2012/TrainingDay/WS5?highlight=%28init.d%29
are not working anymore. Whet is the new
. But this woudn't make me very happy.
in File: /lib/galaxy_ext/metadata/set_metadata.py
a sys.path.insert to .venv/lib should be added. I don't know what the right
plcae for this is.
Do you hava any better ideas for this matter?
Eric
On 8 April 2016 at 16:15, Eric Kuyt <eric.ku...@wur.nl>
are not working anymore.
What is the new startup procedure? I kind of dislike galaxy changing to
virtualenv and not change your documentation and not answering my question.
On 17 March 2016 at 14:00, Eric Kuyt <eric.ku...@wur.nl> wrote:
> Hey guys, today I updated to the latest version of gal
Hey all,
I have a question about the samtools_slice_bam tool in the samtools suite.
It seems the references variable remains empty after re-detecting metadata.
I now tried sorting the bam in galaxy and manually in samtools, but no
references coming up.
I also ran a breakpoint in the
Is this the right spot for this question? Or is it better to ask elsewhere?
On Mon, 13 May 2019 at 09:50, Eric Kuyt wrote:
> Hey all,
>
> I have a question about the samtools_slice_bam tool in the samtools suite.
>
> It seems the references variable remains empty after re-detec
