ding from URL
http://chem-fingerprints.googlecode.com/files/chemfp-1.1p1.tar.gz:
HTTP Error 404: Not Found
This link is the same it's in cargo-port [1], but isn't working, can you
help me?
[1] https://github.com/galaxyproject/cargo-port/blob/master/urls.tsv#L
t by using "reply all"
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gt; and other Galaxy lists, please use the interface at:
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*Léo Biscassi*
_
command return is '*/bin/sh: 1: deps/_conda/bin/conda: not found*', but
the binary exist. Anyone can help me with this?
Thanks in advance.
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*Léo Biscassi*
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ToolsWithDependenciesInSeparateRepositories
>
> Where on the wiki do people think would be best?
>
> Peter
>
> On Sun, Aug 28, 2016 at 9:41 PM, Léo Biscassi
> wrote:
> > Nice job! I was really anxious for some documentation about this theme!
> > Thanks all involved!
>
ant support in making tools better in Galaxy –
> Lance I hope with Conda you will have less pain with dependencies in
> general!
>
> Last but not least I would like to thank the entire IUC and the over 50
> IUC contributors that have migrated most of the IUC tools to Conda
> packages o
in galaxy implementation, about?
I'm pretty excited, this is a great job!
[1] https://twitter.com/galaxyproject/status/758727733643874304
Thanks for your attention!
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*Léo Biscassi*
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in your mail client. To mana
ah ... one observation, the mercurial was substituted for git. If you need
help I can help you in portuguese, send me one email.
Att.
On Mon, Jun 27, 2016 at 3:24 PM Léo Biscassi wrote:
> Hi Álvaro, welcome to the galaxy community! Brazilian guy here too! :)
> I made this post in portugu
;
> To search Galaxy mailing lists use the unified search at:
> http://galaxyproject.org/search/mailinglists/
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in you
s really nice!
>
>
> On 15.03.2016 08:28, Léo Biscassi wrote:
>
> Hi Bjorn, I've created the pull request [1] in your repository. I will be
> grateful if you can assist me with the functional tests on the docking tool
> and the final validation of the tool dependencies.
&g
, Mar 14, 2016 at 12:56 PM Léo Biscassi
wrote:
> Hi, thanks for the reply.
> About the branch model, ok! I'll follow the model presented.
> About the error in planemo functional tests, the problem is that the
> content of example output is not the same of output file of test.
I'll create a pull request in your repository for that we can fix
the problem.
Thank for the helps.
I'm excited about this.
Best regards,
On Thu, Mar 10, 2016 at 5:51 PM Björn Grüning
wrote:
>
>
> Am 10.03.2016 um 21:30 schrieb Léo Biscassi:
> > Hi folks,
> > I hav
/autodock_vina_tools
[4]
https://github.com/leobiscassi/autodock_vina_tools/tree/docking/tools/docking
Att.
On Sat, Jan 30, 2016 at 3:44 PM Léo Biscassi wrote:
> Hi Bjorn, the branch model of ChemicalToolBoX is the same presented in
> [1]? Could guide me about it?
>
> [1] https://github.com/g
424
> Place Georges Teissier 29680 Roscoff FRANCE
> tel: +33 2 98 29 23 81
> ------
>
>
>
> Le 3 mars 2016 à 07:31, Léo Biscassi a écrit :
>
> Hi, the command that you suggested not working, the same outp
xml
>
> or to a directory full of tools.
>
> planemo test /foo/bar
>
> Hope this helps,
> Bjoern
>
> Am 03.03.2016 um 04:48 schrieb Léo Biscassi:
> > Hi Folks,
> > I tried follow this tutorial [1], but I have problems in execute the
> > command "planemo
magem2.jpg]
*Figure 2:* Error
[image: imagem3.jpg]
*Figure 3: *Galaxy Path
Planemo's version is 0.23.0.
[1] https://planemo.readthedocs.org/en/latest/writing_standalone.html
P.S: The command is utilized for same tool presented in tutorial.
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Hi Bjorn, the branch model of ChemicalToolBoX is the same presented in [1]?
Could guide me about it?
[1] https://github.com/galaxyproject/galaxy/blob/dev/CONTRIBUTING.md
Att.
On Mon, Dec 28, 2015 at 5:04 PM Léo Biscassi wrote:
> Ok, thanks!
>
> Best regards,
>
> On Mon, Dec 2
ninistr. 15, K U1 808
> D-81377 Munich (Germany)
> Tel: +49 89 4400 77499
>
> ___
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> and
Ok, thanks!
Best regards,
On Mon, Dec 28, 2015 at 5:36 PM Björn Grüning
wrote:
>
>
> Am 28.12.2015 um 20:33 schrieb Léo Biscassi:
> > Hi,
> > Thanks all your attention.
> > Although my project is functional prototype, its current version is able
> to
> > int
a great opportunity for
me.
Can you update the trello card with my project? Is it necessary for your
organization?
Best regards,
On Mon, Dec 28, 2015 at 5:12 PM Björn Grüning
wrote:
>
>
> Am 28.12.2015 um 20:06 schrieb Léo Biscassi:
> > Hi,
> >
> > I've fo
the visualisation, because this was more fun :)
>
> Have a look at this board for more ideas:
> https://trello.com/b/t9Wr8lSY/chemicaltoolbox
>
> Ciao,
> Bjoern
>
>
> Am 28.12.2015 um 19:29 schrieb Léo Biscassi:
> > Hi Bjorn, thanks for reply.
> > Would be great
alaxy-iuc-standards.readthedocs.org/en/latest/ for best practices.
>
> Let us know if we can help.
>
> Thank you for using Galaxy.
>
> M.
>
> On Mon, Dec 28, 2015 at 12:58 PM Léo Biscassi
> wrote:
>
>> Hi folks,
>>
>> I've been developing Galax
g forward to join forces here!
> Bjoern
>
>
> Am 28.12.2015 um 18:58 schrieb Léo Biscassi:
> > Hi folks,
> >
> > I've been developing Galaxy tools for docking protein-compounds. My
> docking
> > program is Autodock Vina. In [1] is my repository.
> >
> &g
Galaxy project. Are they welcome
for Galaxy project? Let me know the best practices for developing tools to
be shared in Galaxy project.
[1] https://github.com/leobiscassi/galaxy_tools
[2] https://toolshed.g2.bx.psu.edu/
Thanks for any help.
Att.
--
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xml#L218
>
> Cheers,
> Bjoern
>
> On 10.09.2015 23:01, Léo Biscassi wrote:
>
> Good afternoon people!
> I am developing a tool that will have multiple outputs where they have to
> be data sets in history.
> Read the tutorial [1] and from it developed my [2] [3] tool, however
t caught me out multiple times when testing multiple outputs.
>
> Christian
> --
> *From:* galaxy-dev [galaxy-dev-boun...@lists.galaxyproject.org] on behalf
> of Léo Biscassi [leo.bisca...@gmail.com]
> *Sent:* Thursday, September 10, 2015 10:01 PM
> *To:
?
[1]
https://wiki.galaxyproject.org/Admin/Tools/Multiple%20Output%20Files#Handling_Multiple_Output_Files_in_Galaxy
[2] https://gist.github.com/leobiscassi/8058b6307d388167866a
[3] https://gist.github.com/leobiscassi/bc54a7df261c4ee81aa9
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package:
apt-get install freeglut3-dev
[1] https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox
Has anyone had a similar experience?
I am using ubuntu 14.04
Att.
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