Re: [galaxy-dev] Multiple input file bug

2012-02-03 Thread Fields, Christopher J
yep, that works. modifying it to only display with 'input dataset' makes sense. Just curious, but how stable is the workflow API for IO nodes? For instance, I could see creating a custom input node for splitting data for parallel processing, then combining processed data into a final report

Re: [galaxy-dev] Multiple input file bug

2012-02-03 Thread Dannon Baker
Oh, I see what you're doing, thanks for clarifying. Add an Input Dataset step and it should work fine. The original intent for multiple input scaling was really designed explicitly for that scenario using the Input Dataset workflow steps and the fact that it works for some tools directly was a

Re: [galaxy-dev] Multiple input file bug

2012-02-03 Thread Fields, Christopher J
Minimal case is a single-node workflow with FastQC (tophat also had the same problem): http://test.g2.bx.psu.edu/u/cjfields/w/test maybe it's tool-specific? chris On Feb 3, 2012, at 1:10 AM, Dannon Baker wrote: > Can you share a workflow that's failing for you on test with me? I just > tri

Re: [galaxy-dev] Multiple input file bug

2012-02-02 Thread Dannon Baker
Can you share a workflow that's failing for you on test with me? I just tried a simple workflow with nothing but an input and FastQC and ran with multiple inputs successfully. Thanks! Dannon On Feb 2, 2012, at 11:15 PM, Fields, Christopher J wrote: > Just filed as Issue #714 on bitbucket.

[galaxy-dev] Multiple input file bug

2012-02-02 Thread Fields, Christopher J
Just filed as Issue #714 on bitbucket. I noticed that multiple input seems to be broken on workflows when selecting more that one file (a single file works). This is happening on our local instance, using Jan 27 galaxy-dist release, as well as both main/test.g2.bx.psu.edu Galaxy servers (latte