R4 Canada
From: Aaron Petkau [aaron.pet...@gmail.com]
Sent: Friday, August 01, 2014 12:26 PM
To: Dooley, Damion
Cc: galaxy-dev@lists.bx.psu.edu
Subject: Re: [galaxy-dev] Toolshed tool_dependency.xml git archive configure
issue
Hmmm... you know what. I tested this out and it looks like Galax
Hmmm... you know what. I tested this out and it looks like Galaxy expects
the git repo to be named the same as the package name in your tool
dependencies file ffp-phylogeny. If you change the git command to:
git clone https://github.com/apetkau/ffp-3.19-custom.git *ffp-phylogeny*
I think it sho
A little more info:
ls -a
#
ls -a
STDOUT
.
..
#
#
ls -a
STDERR
so I guess the .git archive is being unpackaged somewhere else! After lunch
I'll return to ex
@lists.bx.psu.edu
Subject: Re: [galaxy-dev] Toolshed tool_dependency.xml git archive configure
issue
Hey Damion,
You should be able to do ./configure --disable-gui ... to get it to work (that
is, make sure the full path to the configure command is given). At least I
think that's probably what&#x
Hey Damion,
You should be able to do *./*configure --disable-gui ... to get it to work
(that is, make sure the full path to the configure command is given). At
least I think that's probably what's going on.
Aaron
On Fri, Aug 1, 2014 at 12:32 PM, Dooley, Damion
wrote:
> Hi folks,
>
> Having a
Hi folks,
Having a difficult time with coding the "configure" step in this new
tool_dependency.xml file, namely that an error "/bin/sh: configure: command not
found" results when I try to install my beta development tool from a local test
toolshed (which is downloading and installing other tool
