Thank you, Peter and Greg, for your feedback.
Unfortunately, I am still hitting a wall with the hmmer install - even
after creating a dummy hmmer.loc file and a hmmer.loc.sample file in my
tool-data dir. All of my paths seem to be ok. Has anyone gotten hmmer to
work on galaxy? Do I need to rest
On Mon, Dec 2, 2013 at 4:50 AM, Karen Miga wrote:
> Hi Greg,
>
>Thanks for the feedback. I cannot seem to find information for
> hmmdb.loc. When I look in the associated xml file it looks like it could
> be removed completely (does one need a precompiled HMM Database? I do not
> remember usi
Hi Greg,
Thanks for the feedback. I cannot seem to find information for
hmmdb.loc. When I look in the associated xml file it looks like it could
be removed completely (does one need a precompiled HMM Database? I do not
remember using anything like this when I run hmmer on the commandline). I
Hello Karen,
You are undoubtedly seeing only the hmmpress tool because the other tool in
that repository is not valid:
Contents of this repository
Valid tools - click the name to preview the tool and use the pop-up menu to
inspect all metadata
NameDescription Version
hmmpressCo
Hello,
I would like to use hmmer on our cloudman instance. However, when I
install I am only finding a wrapper for hmmpress. There was some
conversation about this back in 2012 (
http://gmod.827538.n3.nabble.com/Missing-tool-previews-in-tool-shed-e-g-hmmer-xml-td3838635.html).
I installed
