Re: [galaxy-dev] missing "fastq groomer" tool on galaxy cloudman

2014-10-13 Thread Masoumeh Sikaroodi
Hi, I have a basic install question. I am trying to install Galaxy on my computer (Mac) and I think I have downloaded all necessary files (Galaxy and mercurial, and I have python 2.6), but I think I have the files in wrong place (in my user folder) and when I try t do hg for example it says I d

Re: [galaxy-dev] missing "fastq groomer" tool on galaxy cloudman

2014-10-13 Thread Dannon Baker
Hi Namit, This is an oversight and that tool should be installed by default. We'll make it so in the next Cloudman release. That said, it's really easy to install this (and other tools) on your cloud instances using the toolshed. Steps: - Make yourself an admin user (see the cloudman admin int

[galaxy-dev] missing "fastq groomer" tool on galaxy cloudman

2014-10-13 Thread NAMIT KUMAR
Hello, I am using galaxy on amazon web servers ( AMI: ami-a7dbf6ce; Name: Galaxy CloudMan 2.3). This is a setup I have used several time in the past with no issue, for suddenly since yesterday- there is *NO option of fastq groomer tool* on this ami. fastq groomer tool is still available on public