Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-30 Thread Peter Cock
On Thu, Oct 17, 2013 at 4:28 PM, Peter Cock wrote: > On Thu, Oct 17, 2013 at 4:05 PM, Eric Rasche wrote: >> -BEGIN PGP SIGNED MESSAGE- >> Hash: SHA1 >> >> Peter, >> >> On 10/17/2013 07:58 AM, Peter Cock wrote: >>> On Fri, Oct 4, 2013 at 2:24 PM, Peter Cock >>> wrote: On Fri, Oct 4,

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-17 Thread Peter Cock
On Thu, Oct 17, 2013 at 4:05 PM, Eric Rasche wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > Peter, > > On 10/17/2013 07:58 AM, Peter Cock wrote: >> On Fri, Oct 4, 2013 at 2:24 PM, Peter Cock wrote: >>> On Fri, Oct 4, 2013 at 2:09 PM, Eric Rasche wrote: Yes, the code is definit

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-17 Thread Eric Rasche
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Peter, On 10/17/2013 07:58 AM, Peter Cock wrote: > On Fri, Oct 4, 2013 at 2:24 PM, Peter Cock wrote: >> On Fri, Oct 4, 2013 at 2:09 PM, Eric Rasche wrote: >>> Yes, the code is definitely broken somewhere else, not in this function, but >>> this fix

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-17 Thread Peter Cock
On Thu, Oct 17, 2013 at 1:01 PM, Sarah Diehl wrote: > Hello everyone, > > any news on this bug? I have the same issue here, with the error > TypeError: column_types is undefined @ > http://galaxy.immunbio.mpg.de/static/scripts/mvc/data.js:188 > > The suggested fix works for me, but the resulting

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-17 Thread Peter Cock
On Fri, Oct 4, 2013 at 2:24 PM, Peter Cock wrote: > On Fri, Oct 4, 2013 at 2:09 PM, Eric Rasche wrote: >> Yes, the code is definitely broken somewhere else, not in this function, but >> this fix ensures that data is at least visible. However, data is right >> aligned as you mentioned, which is de

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-17 Thread Sarah Diehl
ginal Message - From: "Ian Misner" To: galaxy-dev@lists.bx.psu.edu Sent: Friday, October 4, 2013 1:17:54 PM Subject: Re: [galaxy-dev] Tabular data not displaying in main panel Hello All, I'm having the same issue with tabular data not displaying,but I'm afraid I'm much n

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-04 Thread Ian Misner
Hello All, I'm having the same issue with tabular data not displaying,but I'm afraid I'm much newer to running a local galaxy instance. Apparently switching to https://bitbucket.org/galaxy/galaxy-central/src/a477486bf18eafdd14dd7ba1e91e17f1b05e8121/scripts/functional_tests.py?at=stable but f

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-04 Thread Peter Cock
On Fri, Oct 4, 2013 at 2:09 PM, Eric Rasche wrote: > Yes, the code is definitely broken somewhere else, not in this function, but > this fix ensures that data is at least visible. However, data is right > aligned as you mentioned, which is definitely undesirable. I would find this an improvement

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-04 Thread Eric Rasche
Yes, the code is definitely broken somewhere else, not in this function, but this fix ensures that data is at least visible. However, data is right aligned as you mentioned, which is definitely undesirable. As for getting the script onto multiple lines, you are correct, you'd need to serve the

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-04 Thread Peter Cock
On Thu, Oct 3, 2013 at 6:34 PM, Björn Grüning wrote: > Hi Sam, > > any chance to commit that fix to Galaxy-stable? > > Thanks! > Bjoern The error Sam and Eric reported is different to mine, and so this doesn't solve the display issue on my machine: $ hg diff static/scripts/mvc/data.js diff -r c4

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Björn Grüning
Hi Sam, any chance to commit that fix to Galaxy-stable? Thanks! Bjoern > Thanks Eric. I updated the data.js file in an attempt to catch this > error. > > > On Thu, Oct 3, 2013 at 12:14 PM, Eric Rasche > wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > >

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread sam guerler
Thanks Eric. I updated the data.js file in an attempt to catch this error. On Thu, Oct 3, 2013 at 12:14 PM, Eric Rasche wrote: > -BEGIN PGP SIGNED MESSAGE- > Hash: SHA1 > > I see the same issue, repeatedly on my galaxy instance. Running > unmodified from the galaxy-dist/default branch.

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Eric Rasche
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 I see the same issue, repeatedly on my galaxy instance. Running unmodified from the galaxy-dist/default branch. Since I'm running the uncompressed data.js, I get a bit more information from my errors than Peter's > [10:05:12.293] TypeError: j is unde

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Peter Cock
The good news is that running the default branch from galaxy-central seems to work, so at some point the fix/change/regression should reach the stable releases on galaxy-dist as well. Peter On Thu, Oct 3, 2013 at 3:12 PM, Peter Cock wrote: > On Thu, Oct 3, 2013 at 2:47 PM, sam guerler wrote: >

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Peter Cock
On Thu, Oct 3, 2013 at 2:47 PM, sam guerler wrote: > Hi Peter, > > I cannot reproduce the type error you are observing, but that one might be > critical. The second message is rather an information than an error message. > Is it possible that data.js is modified in your local galaxy version? You >

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread sam guerler
Hi Peter, I cannot reproduce the type error you are observing, but that one might be critical. The second message is rather an information than an error message. Is it possible that data.js is modified in your local galaxy version? You could apply an hg diff on data.js or maybe send the first few

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Peter Cock
On Thu, Oct 3, 2013 at 8:02 AM, Hans-Rudolf Hotz wrote: > Hi Peter and Bjoern > > we had similar problems in August, when we upgraded to 'release_2013.06.03'. > The problem has disappeared now. > > At the time I had the suspicion, it only happened to browser sessions which > were already open befo

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-03 Thread Hans-Rudolf Hotz
Hi Peter and Bjoern we had similar problems in August, when we upgraded to 'release_2013.06.03'. The problem has disappeared now. At the time I had the suspicion, it only happened to browser sessions which were already open before the upgrade, Hence, closing the browser, and starting again h

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-02 Thread sam guerler
Hi Peter, Does the Javascript console of the browser show any error messages? Thanks, Sam On Wed, Oct 2, 2013 at 2:48 PM, Björn Grüning < bjoern.gruen...@pharmazie.uni-freiburg.de> wrote: > Hi Peter, > > we can confirm. Latest Galaxy stable version and its occurring randomly. > I was not able

Re: [galaxy-dev] Tabular data not displaying in main panel

2013-10-02 Thread Björn Grüning
Hi Peter, we can confirm. Latest Galaxy stable version and its occurring randomly. I was not able to reproduce it by myself. Cheers, Bjoern > Hi all, > > Multiple users of our internal Galaxy server have reported with > multiple browsers that tabular data is not displayed in the main > central