Hi Greg,
- Toolshed uses a separate (from Galaxy) postgres database, called
toolsheddb.
- Mercurial has version 1.4. <--- THIS IS THE PROBLEM (default in the
repo of Centos6.2) -- see below
[quote] The hgweb.config file should be automatically created in your
Galaxy install directory when yo
Hi,
I stopped toolshed, dropped the database, and recreated it.
Relaunched toolshed without errors. I have create a login again, created
a category (no problems), and tried to create a repo, which upon saving
gives me the error again.
Is it a problem that I use the same user for access to bo
Try completely dropping and recreating your tool shed database. Also, what
version of Galaxy are you running and what version of Python are you running?
What database / version are you using?
On Apr 2, 2012, at 11:13 AM, Joachim Jacob wrote:
> Thanks for the suggestions, but no joy.
>
> 1.
Thanks for the suggestions, but no joy.
1. I have created hgweb.config like this in the main install dir
[galaxy@galaxy galaxy-dist]$ pwd
/home/galaxy/galaxy-dist
[galaxy@galaxy galaxy-dist]$ cat hgweb.config
[paths]
2. I have removed all repo directories from the toolshed database
[galaxy@galax
This is the problem - it's unclear how your local tool shed environment is
missing this file as it must have been generated the first time your started
your tool shed application ( via sh run_community.sh ). Since this file does
not exist, you must not yet have created any repositories, so manu
I am sorry, but I do not have a hgweb.config file in the install dir.
My organisation:
/home/galaxy/toolshed --> toolshed database for local repositories
/home/galaxy/galaxy-dist --> main installation directory
/home/galaxy/shed_tools --> dir for shed tools installed in galaxy
Note:
It should be in your Galaxy installation directory, and your on-disk
repositories will be in a directory under the setting you've defined for the
"file_path" configuration in your community_wsgi.ini file.
On Apr 2, 2012, at 10:17 AM, Joachim Jacob wrote:
> Hi Greg,
>
>
> If it is most likely
Hi Greg,
If it is most likely a configuration error, I will check my settings,
and let you know my progress.
But one note: I do not have a hgweb.config file. Where is it supposed to
reside? I cannot find this info on the toolshed wiki.
Joachim
On 04/02/2012 03:30 PM, Greg Von Kuster wro
Hi Joachim,
I've not seen this in any of my tool shed development environments, nor using
the test or main Galaxy tool sheds, so it is unlikely that this is a bug. It
looks more likely to be a configuration problem in your local tool shed
environment. Do the repositories defined in your hgweb
