So I am doing some debugging and it looks like in the from_html function in
the SelectToolParameter class, it gets the legal values for the build using
the get_legal_values function. This returns the correct values when I
choose only one gtf file, but when I choose multiple gtf files the list of
le
Hi Nikhil,
I would suggest to open an issue on
https://github.com/galaxyproject/tools-devteam/issues
Best,
Nicola
Il
20.02.2015 10:28 Nikhil Joshi ha scritto:
> So I am doing some
debugging and it looks like in the from_html function in the
SelectToolParameter class, it gets the legal values
I tried installing biopython and dependancies from the toolshed but this does
not seem to be functional even though these tools say INSTALLED. Is there
something that I should do that I missed? I sis better to installed them in
the regular python fashion?
--
David Lapointe Ph.D.
Sr. Bioinforma
On Fri, Feb 20, 2015 at 3:56 PM, Lapointe, David
wrote:
> I tried installing biopython and dependancies from the toolshed but this
> does not seem to be functional even though these tools say INSTALLED.
How are you testing it? Any Galaxy copy of Biopython will not be
available to the system Pytho
Hi,
I'm seeing the following error when trying to use upload file with a local file
that is larger than 8Kb:
galaxy.web.framework.decorators ERROR 2015-02-19 16:51:48,280 Uncaught
exception in exposed API method:
Traceback (most recent call last):
File "/BigData/galaxy/galaxy-dist/lib/galaxy/
I am not sure what the problem is - any chance you can share your
nginx configuration file?
On Fri, Feb 20, 2015 at 1:13 PM, Briand, Sheldon
wrote:
> Hi,
>
>
>
> I’m seeing the following error when trying to use upload file with a local
> file that is larger than 8Kb:
>
>
>
> galaxy.web.framework
Hi,
user galaxy;
worker_processes 1;
#error_log logs/error.log;
#error_log logs/error.log notice;
#error_log logs/error.log info;
#pidlogs/nginx.pid;
error_log /var/log/nginx/error.log info;
pid/var/run/nginx.pid;
events {
worker_connections 1024;
}
http {
in
Hi Dannon,
I'm stoked that Charles's PR made it into master -- thanks!
Have you had a chance to look into the job_work and temp extra_dir issue?
Please let me know if there's anything I can do to help out!
Cheers,
Brian
On Mon, Feb 9, 2015 at 1:39 PM, Dannon Baker wrote:
> Hey Brian,
>
> Th